iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109568

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377585

Gene Name

SELMODRAFT_173029

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_173029	EFJ25923	EFJ25923

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-25	87.2	111	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v  +++ ++ ++lv+Gs+D+t+k WDlr++ + +
   Q: 111  HDAPVKEISWiPEmNFLVTGSWDKTLKYWDLRSQSPAH 148
           899999*****999******************998765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MATFGVTQNA PSHNPNKSFE IAERPTDGIS SLSFSPKANH LIATSWDNQV RCWEIQPNGT 60
SVAKAATQHD QPVLCSAWKD DGTTVFSGGC DKQVKMWPLS SGNQSVTVGM HDAPVKEISW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACTT TCGGCGTCAC ACAGAACGCT CCGTCTCACA ATCCCAACAA ATCTTTCGAG 60
GTACGCGCAT CAATCTCGCG CAAGAATCTC TCTTACCTGT GTGTCAGATC GCAGAGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_173029

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	69.66	8.00e-141	492.00
IUUC-Aly-006015	Arabidopsis lyrata	69.14	9.00e-151	525.00
IUUC-Ath-007659	Arabidopsis thaliana	69.43	1.00e-151	528.00
IUUC-Bol-015367	Brassica oleracea	70.85	1.00e-151	528.00
IUUC-Bra-016903	Brassica rapa	70.85	1.00e-151	528.00
IUUC-Cne-026774	Cryptococcus neoformans	41.74	6.00e-70	256.00
IUUC-Dse-031161	Dothistroma septosporum	46.36	8.00e-82	296.00
IUUC-Gma-043683	Glycine max	71.43	3.00e-154	536.00
IUUC-Hvu-047380	Hordeum vulgare	73.02	3.00e-144	503.00
IUUC-Mtr-057675	Medicago truncatula	70.86	3.00e-154	536.00
IUUC-Tae-122978	Triticum aestivum	73.24	3.00e-144	503.00
IUUC-Tme-127152	Tuber melanosporum	51.18	4.00e-92	330.00
IUUC-Vda-129865	Verticillium dahliae	47.11	1.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence