iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095329

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545051

Gene Name

PHYPADRAFT_218754

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S162_132V6	PP1S162_132V6.1	PP1S162_132V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-07	32.8	180	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ + +l+f  d  l++s sdD  +++WD+
   Q: 180  HKS-IKDLDFsLDgSLVASTSDDSACRIWDM 209
           555.9999999665899*************6 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSKKGRYLLC SKKYGQPLFA GAWVKGKKKG DGDGDGKEEA EEEGLVLLAG GGGNQRSGVP 60
NSLLLAEYDF ESTVLTDALD TFTTADDPPY RMAAHPAGEG VVCSFEKDCR LFEVCRDDAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCAGAGCG AGCGAGCGAG CGAGGCCAGA GGAGGGAGGT GTTTGATGAT CTCGCACGAA 60
GTGAGAGTTT GGATTTTTCC ACCGCAAGGG AAGAGGAGGA GCATTGCGAT CGGTGGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

ppp:PHYPADRAFT_218754

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005479	Arabidopsis lyrata	37.33	3.00e-52	198.00
IUUC-Ath-007466	Arabidopsis thaliana	36.68	4.00e-50	191.00
IUUC-Bra-016660	Brassica rapa	38.10	7.00e-53	200.00
IUUC-Gma-043946	Glycine max	35.01	6.00e-53	200.00
IUUC-Mtr-058661	Medicago truncatula	39.12	3.00e-62	231.00
IUUC-Mvi-060443	Microbotryum violaceum	27.12	5.00e-21	95.10
IUUC-Ppe-101864	Prunus persica	36.39	1.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence