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Tag Content
UUCD2 ID IUUC-Pop-099232
UUCD1 version UUC-PoT-01713
Ensembl Protein ID POPTR_0006s28540.1
UniProt Accession B9HBI2; B9HBI2_POPTR
Genbank Protein ID EEE92251.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000342
Gene Name POPTRDRAFT_867192; POPTR_0006s28540g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s28540 POPTR_0006s28540.1 POPTR_0006s28540.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.30e-74 251.7 181 486
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
    +Gl N gN+C+ N vLQcL+ +++l +ll+ ++ +++++ + ++l+++q+ +e ++++ +sp ++++ l ++ ++ +q+
   Q: 181 CGLLNCGNSCFANVVLQCLTYTRPLVAYLLKkGHQTECKHN-----DWCFLCEFQSHVERA-SQSTLPFSPINIISRLPNIGGNLGYGRQE 265
    7******************************4555566555.....67**********999.99999************************ PP
   S: 91 DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
    Da+Ef++ +d++++ + +e++ + + ++ ++++++i+++F+g+l+sq++c +c+++s+++e+++dl+++++g+
   Q: 266 DAHEFMRLAIDTMQSVC--------LDEFGGE-------KAVEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAA 341
    *****************........3344444.......789999*********************************************6 PP
   S: 182 tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
    sl++cL++ft +e l+gen+y+c++c+++++a k+l++++ P+vL++ LkRf + ++ k+nk+v+fp++Ldlsp++++ ++
   Q: 342 ----SLEECLDQFTDKEWLHGENMYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRF----QSGRFGKLNKRVTFPEMLDLSPYMSEGGDG- 423
    ....8***************************************************....346668********************5555. PP
   S: 273 kekkkYeLiavvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    ++ Y+L+avvvH l+ GHY++y k+ +g+W ++dD kV++v+ +evl+ + aY+l+Y r
   Q: 424 --TDVYKLYAVVVHVDMLNAsffGHYICYTKDFHGNWHRIDDCKVSSVELDEVLS---QGAYMLVYSR 486
    ..89**********995554455********************************...********87 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MHVGGITVDL NWLLQFIFTV FVIGLGLLHL VKNTASKYFE VGANFEAAES SHTAIDPNII 60
NQAVEAEEDS SICGNCGGFG TKKCSRCKSV RYCSQRCQEA DWKAGHKLKC KDFKLNSSQT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099232|DUB,USP|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAAAAATAA AAACCCTAAC AAAACACTAT TCACAAACTC TCCTCTCAAA ATCCCTAATT 60
TACATGTAAA AAGAAAGGAG AAAAACACGC AAAAAATCCT TTGATTAATG CATGCAAACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099232|DUB,USP|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG pop:POPTR_0006s28540g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002997 Amborella trichopoda 58.45 5.00e-167 580.00
IUUC-Aly-005863 Arabidopsis lyrata 61.21 0.00e+00 690.00
IUUC-Ath-007334 Arabidopsis thaliana 65.23 0.00e+00 697.00
IUUC-Bol-016021 Brassica oleracea 65.41 0.00e+00 661.00
IUUC-Bra-017569 Brassica rapa 64.03 0.00e+00 654.00
IUUC-Oin-079613 Oryza indica 61.12 5.00e-161 561.00
IUUC-Ppa-095982 Physcomitrella patens 56.02 1.00e-149 523.00
IUUC-Sbi-113982 Sorghum bicolor 62.16 7.00e-171 593.00
IUUC-Tae-125546 Triticum aestivum 62.92 6.00e-165 574.00
Created Date 25-Jun-2017

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