iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098871

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_753649; POPTR_0001s46260g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s46260	POPTR_0001s46260.1	POPTR_0001s46260.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	27.61	2.00e-25	114.00	IUUC-Ath-007075

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDKGEATIET GATKSSEGRE SKIGRVQAVG YHIPQDIVAE ILAKLPAKSL MRFRCVCKTW 60
SSLIRDPFFV KLHQNQSLNK PCKTGLLMST KHQLFNSHFV FADHEGKQAL EEDTISIPKS 120

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Nucleotide Sequence
(Fasta)

ATGGACAAAG GCGAAGCCAC CATTGAAACA GGAGCAACAA AATCCAGTGA AGGCCGTGAA 60
AGCAAGATTG GAAGAGTTCA AGCTGTAGGA TATCACATCC CACAAGATAT AGTTGCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

KEGG

pop:POPTR_0001s46260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000960	Aegilops tauschii	26.62	4.00e-18	86.30
IUUC-Atr-002546	Amborella trichopoda	23.46	1.00e-16	80.50
IUUC-Aly-006099	Arabidopsis lyrata	25.95	3.00e-23	102.00
IUUC-Ath-007075	Arabidopsis thaliana	27.61	8.00e-27	114.00
IUUC-Bdi-014480	Brachypodium distachyon	28.00	1.00e-17	84.00
IUUC-Bol-016117	Brassica oleracea	24.78	5.00e-11	61.60
IUUC-Bra-017514	Brassica rapa	25.28	2.00e-17	82.80
IUUC-Dse-031453	Dothistroma septosporum	28.81	2.30e-01	30.80
IUUC-Gmo-038855	Gadus morhua	35.09	2.00e-03	37.40
IUUC-Hvu-047063	Hordeum vulgare	26.50	8.00e-17	80.90
IUUC-Lpe-050860	Leersia perrieri	26.58	1.00e-13	72.80
IUUC-Loc-051884	Lepisosteus oculatus	32.81	2.00e-05	44.70
IUUC-Mor-057138	Magnaporthe oryzae	35.19	2.00e-03	38.10
IUUC-Oba-075275	Oryza barthii	26.97	3.00e-25	108.00
IUUC-Obr-076542	Oryza brachyantha	24.94	1.00e-22	100.00
IUUC-Ogl-076999	Oryza glaberrima	26.89	5.00e-25	109.00
IUUC-Ogu-078502	Oryza glumaepatula	25.19	2.00e-14	73.20
IUUC-Oin-079851	Oryza indica	24.23	2.00e-14	73.20
IUUC-Olo-080435	Oryza longistaminata	26.89	9.00e-25	107.00
IUUC-Ome-081354	Oryza meridionalis	27.85	1.00e-18	88.20
IUUC-Oni-082603	Oryza nivara	26.97	8.00e-25	108.00
IUUC-Opu-083922	Oryza punctata	23.37	6.00e-15	74.70
IUUC-Oru-084979	Oryza rufipogon	26.97	3.00e-25	109.00
IUUC-Osa-086023	Oryza sativa	26.75	6.00e-25	107.00
IUUC-Pfo-096902	Poecilia formosa	24.11	3.00e-03	37.00
IUUC-Sit-110556	Setaria italica	23.17	3.00e-16	80.10
IUUC-Sbi-113981	Sorghum bicolor	25.63	7.00e-15	75.50
IUUC-Tvi-122651	Trichoderma virens	30.91	3.80e-01	29.60
IUUC-Tae-124485	Triticum aestivum	27.42	7.00e-19	88.20
IUUC-Tur-126662	Triticum urartu	26.27	2.00e-17	82.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence