iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1621__AT2G35910.1	fgenesh2_kg.4__1621__AT2G35910.1	fgenesh2_kg.4__1621__AT2G35910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-08	35.4	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl d+k   ++l+    C+H+fh++C+  w       + + +CP+Cr
   Q: 110  CAICLGDYKG-KHLLRqlpdCNHLFHLKCIDTW------LRLNPTCPVCR 152
           ********55.444444559*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNTFQPPPPP EMPDYNGLLG TDDIGGFRYG IGVSIGVLLL ITTITLTSYY CTRNQLSSSP 60
SQTSQDLTRI HHHHHHVIID VVPGLDEDTI QSYPKILYSE AKGPTTASCC AICLGDYKGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTACCAAT ACAATATTAG CAAATGTATA CATTAATTTT TTTTTATAAC CATCCACAAG 60
TCACACAATT CTTGCTTTGA CAAGCTTTCT TATCCTCATT CACATGCATT TCCTCCCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_482561

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007108	Arabidopsis thaliana	97.78	2.00e-74	271.00
IUUC-Bol-016119	Brassica oleracea	81.11	9.00e-58	214.00
IUUC-Bra-018069	Brassica rapa	84.44	1.00e-55	207.00
IUUC-Gma-044295	Glycine max	61.11	4.00e-30	123.00
IUUC-Lpe-051365	Leersia perrieri	53.54	8.00e-20	89.40
IUUC-Mtr-058770	Medicago truncatula	69.57	4.00e-28	116.00
IUUC-Mac-064629	Musa acuminata	53.01	1.00e-24	105.00
IUUC-Oba-075041	Oryza barthii	56.52	3.00e-19	86.30
IUUC-Obr-076328	Oryza brachyantha	55.07	5.00e-18	83.60
IUUC-Opu-083306	Oryza punctata	54.55	2.00e-18	85.10
IUUC-Pop-099253	Populus trichocarpa	60.94	3.00e-31	127.00
IUUC-Ppe-101919	Prunus persica	62.50	2.00e-30	124.00
IUUC-Sly-111057	Solanum lycopersicum	57.97	1.00e-29	121.00
IUUC-Stu-112816	Solanum tuberosum	62.35	2.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence