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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007471
UUCD1 version UUC-ArT-01448
Ensembl Protein ID AT2G35930.1
UniProt Accession Q84TG3; Q9SJ57; PUB23_ARATH
Genbank Protein ID AAD21464.1; AEC09178.1; AAO64764.1; BAE99354.1
Protein Name E3 ubiquitin-protein ligase PUB23; Plant U-box protein 23; RING-type E3 ubiquitin transferase PUB23; U-box domain-containing protein 23
Genbank Nucleotide ID AC007017; CP002685; BT005829; AK227343
Gene Name PUB23; At2g35930; F11F19.16
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G35930 AT2G35930.1 AT2G35930.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
PINAHINT
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/U-box U-box 19826220
Classification
Family E-value Score Start End
E3 activity/RING/U-box 2.00e-34 118.3 11 84
E3 activity/RING/RING 0.062 14.7 18 56
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
    e+p++flCpIsle+M+dPv++++Gitydr sIekwl g+k +cPvt+q +t+ dl+Pn+tlrrliq+wc n+
   Q: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKnSCPVTKQDITDADLTPNHTLRRLIQSWCTLNA 84
    69**********************************888888****************************9876 PP
   


   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPl 44
    C+i le +kd p++++ g ++ +d ++kw ++ k+ +CP+
   Q: 18 CPISLEIMKD-PVIVSTGITYDRDSIEKW----LFAGKKNSCPV 56
    **********.999***************....99********8 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     E3 ubiquitin-protein ligase that negatively regulates water stress response. May control in coordination with PUB23 a drought signaling pathway by ubiquitinating cytosolic RPN12a. Acts as negative regulator of the immunity triggered by the pathogen-associated molecular patterns (PAMPs), in association with PUB22 and PUB24.
E3 ubiquitin-protein ligase that negatively regulates water stress response. May control in coordination with PUB23 a drought signaling pathway by ubiquitinating cytosolic RPN12a. Acts as negative regulator of the immunity triggered by the pathogen-associated molecular patterns (PAMPs), in association with PUB22 and PUB24.
Protein Sequence
(Fasta)
MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD 60
ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK SEIEKLIRDS ASSHENQVKC 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007471|E3,U-box;E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TATTTTCCGT GTTTTGACTT TTTTAATAAT TGTGAATTTT TGACATCTCC TTTATATTTA 60
AACCCAACCT CCTTTCTCTC TTCCTCCTAA CTTATTCAAA CCAATTCACA TCTTCCCAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007471|E3,U-box;E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005829--C:cytosol
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006952--P:defense response
GO:0051865--P:protein autoubiquitination
GO:0016567--P:protein ubiquitination
GO:0010200--P:response to chitin
GO:0009414--P:response to water deprivation

KEGG ath:AT2G35930
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000639 Aegilops tauschii 46.82 9.00e-84 303.00
IUUC-Atr-002430 Amborella trichopoda 44.83 2.00e-99 355.00
IUUC-Aly-006194 Arabidopsis lyrata 96.56 0.00e+00 750.00
IUUC-Bdi-014627 Brachypodium distachyon 43.98 7.00e-86 310.00
IUUC-Bol-015782 Brassica oleracea 90.91 0.00e+00 712.00
IUUC-Bra-016841 Brassica rapa 90.51 0.00e+00 716.00
IUUC-Hvu-047293 Hordeum vulgare 45.99 2.00e-84 305.00
IUUC-Lpe-051695 Leersia perrieri 41.12 7.00e-67 247.00
IUUC-Mac-065005 Musa acuminata 45.37 6.00e-96 343.00
IUUC-Oba-075095 Oryza barthii 43.90 7.00e-74 270.00
IUUC-Obr-076623 Oryza brachyantha 41.32 8.00e-48 182.00
IUUC-Ogl-077664 Oryza glaberrima 45.79 4.00e-77 280.00
IUUC-Ome-081839 Oryza meridionalis 45.83 3.00e-85 307.00
IUUC-Opu-084067 Oryza punctata 46.23 2.00e-93 335.00
IUUC-Ppa-095659 Physcomitrella patens 33.33 3.00e-60 225.00
IUUC-Ppe-102059 Prunus persica 56.62 1.00e-141 495.00
IUUC-Sit-110734 Setaria italica 42.25 1.00e-81 296.00
IUUC-Sly-111579 Solanum lycopersicum 54.85 4.00e-121 427.00
IUUC-Sbi-114243 Sorghum bicolor 46.15 5.00e-86 310.00
IUUC-Tca-121107 Theobroma cacao 61.93 8.00e-150 522.00
IUUC-Tae-124810 Triticum aestivum 44.34 7.00e-93 333.00
IUUC-Uma-129650 Ustilago maydis 37.50 6.50e-02 30.80
IUUC-Vvi-131052 Vitis vinifera 57.69 1.00e-137 481.00
Created Date 25-Jun-2017

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