iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Acl-008344

Ensembl Protein ID

CADACLAP00002907

UniProt Accession

A1CQI9; ERB1_ASPCL

Genbank Protein ID

EAW07910.1

Protein Name

Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

DS027059

Gene Name

ACLA_026270; erb1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADACLAG00002954	CADACLAT00002954	CADACLAP00002907

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-13	48.9	426	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v++la  ++   l++++dDgt++vW+l tg++l
   Q: 426  GHKGRVRSLAVdPSgLWLATAGDDGTVRVWELLTGRQL 463
           8**********9665789*****************987 PP

Organism

Aspergillus clavatus

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MNASKASKKR KAVTRDVEEE AGVFSGDELN ADNLDGALSD NANDLSSDED DSDSEIELVD 60
EFSEDDEDDE ELDSDEIPSD GEDAVKKKSV TTTDKSGEIA EDAESSSEEE ELDFRIEKDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGCTT CCAAAGCTTC AAAGAAGCGC AAGGCGGTTA CCCGCGATGT CGAAGAGGAA 60
GCAGGTGTTT TCTCTGGGGA TGAGTTGAAC GCAGACAATC TCGATGGCGC GCTTTCGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

act:ACLA_026270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	38.06	8.00e-106	375.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.40	9.00e-133	465.00
IUUC-Atr-003141	Amborella trichopoda	37.75	2.00e-74	271.00
IUUC-Apl-003545	Anas platyrhynchos	39.60	2.00e-118	417.00
IUUC-Aly-005649	Arabidopsis lyrata	41.36	6.00e-137	479.00
IUUC-Ath-007625	Arabidopsis thaliana	41.80	1.00e-129	455.00
IUUC-Ago-007958	Ashbya gossypii	55.10	0.00e+00	757.00
IUUC-Afl-008616	Aspergillus flavus	86.84	0.00e+00	1313.00
IUUC-Afu-009083	Aspergillus fumigatus	89.69	0.00e+00	1291.00
IUUC-Ani-009365	Aspergillus nidulans	85.25	0.00e+00	1276.00
IUUC-Ang-009796	Aspergillus niger	84.99	0.00e+00	1239.00
IUUC-Aor-010015	Aspergillus oryzae	86.84	0.00e+00	1313.00
IUUC-Ate-010537	Aspergillus terreus	85.28	0.00e+00	1312.00
IUUC-Ame-011767	Astyanax mexicanus	47.81	6.00e-64	235.00
IUUC-Bgr-012286	Blumeria graminis	61.80	0.00e+00	943.00
IUUC-Bta-013569	Bos taurus	43.10	6.00e-146	509.00
IUUC-Bci-013820	Botrytis cinerea	63.46	0.00e+00	889.00
IUUC-Bdi-014477	Brachypodium distachyon	41.58	1.00e-131	462.00
IUUC-Bol-016099	Brassica oleracea	42.44	3.00e-138	483.00
IUUC-Bra-017174	Brassica rapa	42.28	6.00e-138	483.00
IUUC-Cel-018201	Caenorhabditis elegans	38.51	4.00e-117	413.00
IUUC-Cja-019009	Callithrix jacchus	38.85	8.00e-127	446.00
IUUC-Cfa-020173	Canis familiaris	39.42	8.00e-130	456.00
IUUC-Cpo-021796	Cavia porcellus	42.64	7.00e-144	502.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.83	9.00e-130	455.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.26	6.00e-152	529.00
IUUC-Cin-025782	Ciona intestinalis	41.40	1.00e-151	528.00
IUUC-Csv-026352	Ciona savignyi	40.85	4.00e-148	516.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	60.27	0.00e+00	738.00
IUUC-Cne-027004	Cryptococcus neoformans	48.72	0.00e+00	640.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.79	9.00e-113	399.00
IUUC-Dre-028658	Danio rerio	44.17	4.00e-154	536.00
IUUC-Dno-028883	Dasypus novemcinctus	42.84	3.00e-145	507.00
IUUC-Dor-031031	Dipodomys ordii	42.48	4.00e-146	509.00
IUUC-Dse-031443	Dothistroma septosporum	61.18	0.00e+00	838.00
IUUC-Dme-031786	Drosophila melanogaster	42.40	3.00e-152	530.00
IUUC-Eca-033677	Equus caballus	43.26	4.00e-145	506.00
IUUC-Eeu-035310	Erinaceus europaeus	40.04	5.00e-109	386.00
IUUC-Fca-035888	Felis catus	41.71	2.00e-144	504.00
IUUC-Fal-037438	Ficedula albicollis	43.54	1.00e-117	414.00
IUUC-Fox-037973	Fusarium oxysporum	63.66	0.00e+00	878.00
IUUC-Fso-038187	Fusarium solani	63.52	0.00e+00	882.00
IUUC-Gmo-039114	Gadus morhua	40.62	9.00e-136	475.00
IUUC-Ggr-039746	Gaeumannomyces graminis	63.68	0.00e+00	903.00
IUUC-Gga-040631	Gallus gallus	41.64	2.00e-77	280.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.70	5.00e-146	509.00
IUUC-Gma-044215	Glycine max	42.86	2.00e-137	481.00
IUUC-Ggo-045587	Gorilla gorilla	43.32	5.00e-152	529.00
IUUC-Hsa-046319	Homo sapiens	43.41	6.00e-152	529.00
IUUC-Hvu-047526	Hordeum vulgare	41.42	3.00e-127	447.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.97	5.00e-146	509.00
IUUC-Kpa-049221	Komagataella pastoris	50.36	0.00e+00	683.00
IUUC-Lch-049640	Latimeria chalumnae	42.64	2.00e-154	537.00
IUUC-Lpe-051135	Leersia perrieri	39.75	3.00e-115	407.00
IUUC-Loc-051930	Lepisosteus oculatus	43.41	9.00e-155	538.00
IUUC-Lma-053290	Leptosphaeria maculans	64.84	0.00e+00	882.00
IUUC-Laf-053903	Loxodonta africana	40.00	1.00e-125	442.00
IUUC-Mcc-055471	Macaca mulatta	42.95	4.00e-151	526.00
IUUC-Meu-056190	Macropus eugenii	42.57	4.00e-145	506.00
IUUC-Mor-057135	Magnaporthe oryzae	65.54	0.00e+00	875.00
IUUC-Mpo-057475	Magnaporthe poae	62.35	0.00e+00	849.00
IUUC-Mtr-058689	Medicago truncatula	39.53	3.00e-122	430.00
IUUC-Mla-059149	Melampsora laricipopulina	48.90	0.00e+00	626.00
IUUC-Mga-059645	Meleagris gallopavo	34.21	2.00e-38	150.00
IUUC-Mvi-060485	Microbotryum violaceum	44.15	9.00e-152	530.00
IUUC-Mmr-061674	Microcebus murinus	44.02	6.00e-146	509.00
IUUC-Mdo-062973	Monodelphis domestica	42.68	9.00e-152	528.00
IUUC-Mmu-064180	Mus musculus	43.10	6.00e-149	519.00
IUUC-Mac-064535	Musa acuminata	39.73	5.00e-86	310.00
IUUC-Mpu-066406	Mustela putorius furo	42.33	4.00e-147	513.00
IUUC-Mlu-067795	Myotis lucifugus	43.10	3.00e-137	480.00
IUUC-Nfi-068516	Neosartorya fischeri	91.39	0.00e+00	1268.00
IUUC-Ncr-068767	Neurospora crassa	64.80	0.00e+00	822.00
IUUC-Opr-071084	Ochotona princeps	45.90	1.00e-59	221.00
IUUC-Ont-071614	Oreochromis niloticus	43.32	2.00e-153	534.00
IUUC-Oba-075980	Oryza barthii	39.60	2.00e-115	407.00
IUUC-Obr-076799	Oryza brachyantha	41.45	1.00e-129	454.00
IUUC-Ogl-077134	Oryza glaberrima	41.60	8.00e-125	439.00
IUUC-Ogu-078655	Oryza glumaepatula	39.75	4.00e-120	423.00
IUUC-Oin-079654	Oryza indica	41.60	1.00e-124	438.00
IUUC-Olo-080706	Oryza longistaminata	40.06	3.00e-116	410.00
IUUC-Ome-081716	Oryza meridionalis	42.94	6.00e-71	260.00
IUUC-Oni-082508	Oryza nivara	39.85	5.00e-117	413.00
IUUC-Opu-083707	Oryza punctata	39.75	1.00e-115	408.00
IUUC-Oru-084453	Oryza rufipogon	40.06	3.00e-116	410.00
IUUC-Osa-085811	Oryza sativa	41.45	2.00e-124	437.00
IUUC-Ola-087361	Oryzias latipes	43.63	2.00e-152	531.00
IUUC-Oga-088015	Otolemur garnettii	43.72	2.00e-152	531.00
IUUC-Oar-090058	Ovis aries	52.87	2.00e-50	191.00
IUUC-Ptr-090631	Pan troglodytes	44.75	2.00e-62	230.00
IUUC-Pan-092306	Papio anubis	43.26	3.00e-152	530.00
IUUC-Pma-094622	Petromyzon marinus	43.81	7.00e-159	551.00
IUUC-Pno-094794	Phaeosphaeria nodorum	60.56	0.00e+00	835.00
IUUC-Ppa-095528	Physcomitrella patens	39.57	4.00e-89	320.00
IUUC-Pfo-096682	Poecilia formosa	43.01	1.00e-156	545.00
IUUC-Pab-097939	Pongo abelii	43.77	6.00e-137	479.00
IUUC-Pop-099530	Populus trichocarpa	43.41	2.00e-124	437.00
IUUC-Pca-100333	Procavia capensis	42.48	3.00e-145	506.00
IUUC-Ppe-102078	Prunus persica	42.28	5.00e-131	459.00
IUUC-Pgr-103525	Puccinia graminis	49.85	4.00e-168	583.00
IUUC-Ptt-103929	Puccinia triticina	49.24	1.00e-161	562.00
IUUC-Pte-104029	Pyrenophora teres	64.79	0.00e+00	926.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	64.79	0.00e+00	928.00
IUUC-Rno-105248	Rattus norvegicus	43.10	5.00e-148	516.00
IUUC-Sce-106381	Saccharomyces cerevisiae	53.17	0.00e+00	737.00
IUUC-Sha-106519	Sarcophilus harrisii	43.12	2.00e-151	527.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	47.85	2.00e-170	590.00
IUUC-Spo-108071	Schizosaccharomyces pombe	47.05	7.00e-162	562.00
IUUC-Smo-109604	Selaginella moellendorffii	40.51	8.00e-122	429.00
IUUC-Sit-110551	Setaria italica	41.69	2.00e-127	447.00
IUUC-Sly-110970	Solanum lycopersicum	43.80	3.00e-76	277.00
IUUC-Stu-112593	Solanum tuberosum	41.15	5.00e-135	473.00
IUUC-Sar-113123	Sorex araneus	40.18	3.00e-59	220.00
IUUC-Sbi-113945	Sorghum bicolor	41.67	1.00e-130	458.00
IUUC-Sre-115188	Sporisorium reilianum	46.11	1.00e-168	585.00
IUUC-Ssc-115352	Sus scrofa	42.70	2.00e-148	517.00
IUUC-Tru-117685	Takifugu rubripes	44.24	1.00e-158	551.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.05	6.00e-151	526.00
IUUC-Tca-121664	Theobroma cacao	42.57	2.00e-137	480.00
IUUC-Tre-122229	Trichoderma reesei	63.36	0.00e+00	791.00
IUUC-Tvi-122576	Trichoderma virens	63.38	0.00e+00	800.00
IUUC-Tae-124110	Triticum aestivum	41.33	8.00e-120	422.00
IUUC-Tur-126781	Triticum urartu	38.23	1.00e-102	365.00
IUUC-Tme-127080	Tuber melanosporum	65.41	0.00e+00	892.00
IUUC-Ttr-128514	Tursiops truncatus	39.78	1.00e-90	325.00
IUUC-Uma-129556	Ustilago maydis	45.86	5.00e-163	566.00
IUUC-Vda-129715	Verticillium dahliae	63.81	0.00e+00	885.00
IUUC-Vvi-131211	Vitis vinifera	41.12	1.00e-127	448.00
IUUC-Xma-133883	Xiphophorus maculatus	43.16	2.00e-152	531.00
IUUC-Yli-134438	Yarrowia lipolytica	52.81	0.00e+00	686.00
IUUC-Zma-135341	Zea mays	37.84	5.00e-122	430.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence