iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-051930

Ensembl Protein ID

ENSLOCP00000009017.1

UniProt Accession

W5MKV8; W5MKV8_LEPOC

Genbank Protein ID

ENSLOCP00000009017

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AHAT01018148

Gene Name

bop1; BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000007429.1	ENSLOCT00000009028.1	ENSLOCP00000009017.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-13	50.8	281	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ v+c++  ++   lvsGsdD+t++ W+++t ++ k+
   Q: 281  GHSSLVRCISVsPSgQWLVSGSDDCTVRFWEVSTARCMKT 320
           8**********966699*******************9875 PP

Organism

Lepisosteus oculatus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

DIRNTVGNIP MEWYKDYPHI GYDLDGKKIY KPIRNKDELD EFLDKMENPD YWRTVHDKMT 60
GMDIRLSDEE VDLVHRLQKG QFGDANFDQY EPYVDFFTHE TMIHPVTNRP EDKRSFIPSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCGAAAT CGGCACATAA GAAGAAGGGG AAAGGGAAAG CTCTGGCTGG AAGAGGGGAG 60
TGTGGAAATA CGGAGCATCA GAGTGACCTG GCGCGCCAGC CCAGCAACCC TCCACCAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	43.75	3.00e-131	462.00
IUUC-Aml-001507	Ailuropoda melanoleuca	68.62	0.00e+00	881.00
IUUC-Atr-003141	Amborella trichopoda	43.59	2.00e-92	333.00
IUUC-Apl-003545	Anas platyrhynchos	71.73	0.00e+00	852.00
IUUC-Aly-005649	Arabidopsis lyrata	47.64	8.00e-166	577.00
IUUC-Ath-007625	Arabidopsis thaliana	47.56	4.00e-163	568.00
IUUC-Ago-007958	Ashbya gossypii	44.46	2.00e-168	586.00
IUUC-Acl-008344	Aspergillus clavatus	43.41	2.00e-143	503.00
IUUC-Afl-008616	Aspergillus flavus	43.43	5.00e-147	514.00
IUUC-Afu-009083	Aspergillus fumigatus	43.88	1.00e-140	493.00
IUUC-Ani-009365	Aspergillus nidulans	43.43	4.00e-145	508.00
IUUC-Ang-009796	Aspergillus niger	42.48	5.00e-141	494.00
IUUC-Aor-010015	Aspergillus oryzae	43.43	5.00e-147	514.00
IUUC-Ate-010537	Aspergillus terreus	44.72	1.00e-151	530.00
IUUC-Ame-011767	Astyanax mexicanus	81.58	5.00e-133	466.00
IUUC-Bgr-012286	Blumeria graminis	46.20	7.00e-156	544.00
IUUC-Bta-013569	Bos taurus	71.87	0.00e+00	931.00
IUUC-Bci-013820	Botrytis cinerea	44.01	3.00e-144	505.00
IUUC-Bdi-014895	Brachypodium distachyon	47.90	1.00e-164	573.00
IUUC-Bol-016099	Brassica oleracea	47.33	8.00e-166	577.00
IUUC-Bra-017174	Brassica rapa	47.16	3.00e-166	579.00
IUUC-Cel-018201	Caenorhabditis elegans	48.31	6.00e-163	567.00
IUUC-Cja-019009	Callithrix jacchus	62.19	0.00e+00	824.00
IUUC-Cfa-020173	Canis familiaris	66.72	0.00e+00	865.00
IUUC-Cpo-021796	Cavia porcellus	73.98	0.00e+00	945.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	48.17	1.00e-160	559.00
IUUC-Csa-023440	Chlorocebus sabaeus	73.01	0.00e+00	966.00
IUUC-Cin-025782	Ciona intestinalis	60.06	0.00e+00	799.00
IUUC-Csv-026352	Ciona savignyi	60.06	0.00e+00	771.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	40.16	5.00e-116	411.00
IUUC-Cne-027004	Cryptococcus neoformans	45.96	5.00e-173	601.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.70	5.00e-123	435.00
IUUC-Dre-028658	Danio rerio	86.06	0.00e+00	1110.00
IUUC-Dno-028883	Dasypus novemcinctus	71.43	0.00e+00	928.00
IUUC-Dor-031031	Dipodomys ordii	71.43	0.00e+00	942.00
IUUC-Dse-031443	Dothistroma septosporum	41.01	3.00e-147	515.00
IUUC-Dme-031786	Drosophila melanogaster	54.46	0.00e+00	743.00
IUUC-Eca-033677	Equus caballus	72.68	0.00e+00	943.00
IUUC-Eeu-035310	Erinaceus europaeus	69.80	0.00e+00	770.00
IUUC-Fca-035888	Felis catus	70.13	0.00e+00	924.00
IUUC-Fal-037438	Ficedula albicollis	65.03	0.00e+00	727.00
IUUC-Fox-037973	Fusarium oxysporum	44.55	9.00e-162	563.00
IUUC-Fso-038187	Fusarium solani	45.02	1.00e-160	559.00
IUUC-Gmo-039114	Gadus morhua	71.20	0.00e+00	910.00
IUUC-Ggr-039746	Gaeumannomyces graminis	42.20	1.00e-154	540.00
IUUC-Gga-040631	Gallus gallus	76.99	4.00e-163	566.00
IUUC-Gac-042582	Gasterosteus aculeatus	74.03	0.00e+00	934.00
IUUC-Gma-044215	Glycine max	46.68	8.00e-154	537.00
IUUC-Ggo-045587	Gorilla gorilla	73.05	0.00e+00	965.00
IUUC-Hsa-046319	Homo sapiens	73.01	0.00e+00	966.00
IUUC-Hvu-047526	Hordeum vulgare	47.57	7.00e-156	544.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	73.01	0.00e+00	952.00
IUUC-Kpa-049221	Komagataella pastoris	42.53	3.00e-155	542.00
IUUC-Lch-049640	Latimeria chalumnae	85.23	0.00e+00	1119.00
IUUC-Lpe-051135	Leersia perrieri	44.34	2.00e-144	506.00
IUUC-Lma-053290	Leptosphaeria maculans	43.92	2.00e-145	509.00
IUUC-Laf-053903	Loxodonta africana	66.61	0.00e+00	838.00
IUUC-Mcc-055471	Macaca mulatta	72.68	0.00e+00	963.00
IUUC-Meu-056190	Macropus eugenii	74.68	0.00e+00	967.00
IUUC-Mor-057135	Magnaporthe oryzae	42.41	8.00e-148	517.00
IUUC-Mpo-057475	Magnaporthe poae	40.94	2.00e-141	496.00
IUUC-Mtr-058689	Medicago truncatula	43.18	2.00e-137	483.00
IUUC-Mla-059149	Melampsora laricipopulina	47.06	6.00e-173	600.00
IUUC-Mga-059645	Meleagris gallopavo	70.90	3.00e-106	377.00
IUUC-Mvi-060485	Microbotryum violaceum	47.28	9.00e-157	548.00
IUUC-Mmr-061674	Microcebus murinus	72.08	0.00e+00	936.00
IUUC-Mdo-062973	Monodelphis domestica	74.63	0.00e+00	985.00
IUUC-Mmu-064180	Mus musculus	72.03	0.00e+00	948.00
IUUC-Mac-064535	Musa acuminata	44.16	2.00e-103	370.00
IUUC-Mpu-066406	Mustela putorius furo	72.03	0.00e+00	954.00
IUUC-Mlu-067795	Myotis lucifugus	72.52	0.00e+00	918.00
IUUC-Nfi-068516	Neosartorya fischeri	43.57	6.00e-134	471.00
IUUC-Ncr-068767	Neurospora crassa	45.67	1.00e-142	500.00
IUUC-Opr-071084	Ochotona princeps	69.29	1.00e-120	426.00
IUUC-Ont-071614	Oreochromis niloticus	74.80	0.00e+00	991.00
IUUC-Oba-075980	Oryza barthii	44.17	4.00e-143	501.00
IUUC-Obr-076799	Oryza brachyantha	47.41	1.00e-159	556.00
IUUC-Ogl-077134	Oryza glaberrima	46.76	2.00e-154	539.00
IUUC-Ogu-078655	Oryza glumaepatula	44.82	2.00e-148	519.00
IUUC-Oin-079654	Oryza indica	46.76	1.00e-154	539.00
IUUC-Olo-080706	Oryza longistaminata	44.17	3.00e-143	501.00
IUUC-Ome-081716	Oryza meridionalis	38.68	6.00e-87	315.00
IUUC-Oni-082508	Oryza nivara	44.26	3.00e-144	505.00
IUUC-Opu-083707	Oryza punctata	44.17	2.00e-142	499.00
IUUC-Oru-084453	Oryza rufipogon	44.17	3.00e-143	501.00
IUUC-Osa-085811	Oryza sativa	46.76	2.00e-154	539.00
IUUC-Ola-087361	Oryzias latipes	76.74	0.00e+00	997.00
IUUC-Oga-088015	Otolemur garnettii	72.03	0.00e+00	971.00
IUUC-Oar-090058	Ovis aries	76.65	1.00e-75	277.00
IUUC-Ptr-090631	Pan troglodytes	66.99	8.00e-123	433.00
IUUC-Pan-092306	Papio anubis	72.89	0.00e+00	962.00
IUUC-Pma-094622	Petromyzon marinus	74.35	0.00e+00	1015.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.51	5.00e-134	471.00
IUUC-Ppa-095528	Physcomitrella patens	44.13	2.00e-100	359.00
IUUC-Pfo-096682	Poecilia formosa	75.61	0.00e+00	995.00
IUUC-Pab-097939	Pongo abelii	72.47	0.00e+00	863.00
IUUC-Pop-099043	Populus trichocarpa	47.97	2.00e-149	522.00
IUUC-Pca-100333	Procavia capensis	71.87	0.00e+00	947.00
IUUC-Ppe-102078	Prunus persica	44.84	6.00e-152	531.00
IUUC-Pgr-103525	Puccinia graminis	46.98	3.00e-161	561.00
IUUC-Ptt-103929	Puccinia triticina	46.20	4.00e-158	552.00
IUUC-Pte-104029	Pyrenophora teres	43.44	1.00e-155	543.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	43.60	4.00e-156	545.00
IUUC-Rno-105248	Rattus norvegicus	73.33	0.00e+00	958.00
IUUC-Sce-106381	Saccharomyces cerevisiae	42.64	5.00e-162	564.00
IUUC-Sha-106519	Sarcophilus harrisii	74.68	0.00e+00	981.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.52	2.00e-144	506.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.43	3.00e-139	488.00
IUUC-Smo-109604	Selaginella moellendorffii	50.47	1.00e-165	576.00
IUUC-Sit-109742	Setaria italica	47.50	1.00e-163	569.00
IUUC-Sly-110970	Solanum lycopersicum	48.56	2.00e-84	306.00
IUUC-Stu-112593	Solanum tuberosum	46.76	1.00e-158	553.00
IUUC-Sar-113123	Sorex araneus	65.40	2.00e-115	408.00
IUUC-Sbi-113945	Sorghum bicolor	47.66	2.00e-162	565.00
IUUC-Sre-115188	Sporisorium reilianum	44.14	6.00e-160	558.00
IUUC-Ssc-115352	Sus scrofa	72.24	0.00e+00	944.00
IUUC-Tru-117685	Takifugu rubripes	75.44	0.00e+00	998.00
IUUC-Tni-119982	Tetraodon nigroviridis	76.58	0.00e+00	973.00
IUUC-Tca-121664	Theobroma cacao	47.49	1.00e-163	569.00
IUUC-Tre-122229	Trichoderma reesei	44.06	1.00e-144	507.00
IUUC-Tvi-122576	Trichoderma virens	45.20	1.00e-147	517.00
IUUC-Tae-124110	Triticum aestivum	47.16	9.00e-147	513.00
IUUC-Tur-126781	Triticum urartu	43.92	4.00e-127	449.00
IUUC-Tme-127080	Tuber melanosporum	49.28	0.00e+00	631.00
IUUC-Ttr-128514	Tursiops truncatus	68.97	0.00e+00	656.00
IUUC-Uma-129556	Ustilago maydis	43.52	5.00e-153	535.00
IUUC-Vda-129715	Verticillium dahliae	44.01	3.00e-154	538.00
IUUC-Vvi-131211	Vitis vinifera	46.23	7.00e-153	534.00
IUUC-Xma-133883	Xiphophorus maculatus	75.28	0.00e+00	966.00
IUUC-Yli-134438	Yarrowia lipolytica	44.17	4.00e-145	508.00
IUUC-Zma-135341	Zea mays	42.16	5.00e-147	514.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence