iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2349__AT2G42030.1	fgenesh2_kg.4__2349__AT2G42030.1	fgenesh2_kg.4__2349__AT2G42030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.40e-07	29.7	131	185
E3 activity/RING/RING	1.30e-08	35.9	134	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPn 58
           +f C I l+l +dPvv+ +G+ y  s++  wl+ ++  +cPv++ +++ ++++P 
   Q: 131  FFDCYICLDLSKDPVVTNCGHLYCWSCLYHWLQVSEAkECPVCKGEVSVKTVTPI 185
           79******************************5555449********99999996 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  kd p+v++CgH+++ +Cl++w     + s +  CP+C+
   Q: 134  CYICLDLSKD-PVVTNCGHLYCWSCLYHW----LQVSEAKECPVCK 174
           99********.999***************....88999999****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGEEISSTVN LDLNLGLGPE LFLEPATNYA RSDWGNGPAR ESESLRRFRS RHRSRFRRID 60
MLPVLAETHS PGMELSQLLI TSANVVALPA GGERVSEDSK KYENGSKVME EDNLAEEKRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCGGTGAA AAATTCCCTT TGACGAATCG GACTTCCAAA AGCTCGCTGA CGAGTTCTCA 60
ACAGTAACCT CGCCGGAGCT TATCGTCTAA AACCAATTCT TTTCCTTCTC CGTGGTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_483289

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007551	Arabidopsis thaliana	88.09	0.00e+00	644.00
IUUC-Bgr-012018	Blumeria graminis	36.25	1.00e-11	62.80
IUUC-Bol-015771	Brassica oleracea	64.79	4.00e-104	370.00
IUUC-Bra-017387	Brassica rapa	62.56	2.00e-103	368.00
IUUC-Fso-038195	Fusarium solani	34.67	8.00e-11	60.80
IUUC-Mac-064666	Musa acuminata	42.41	1.00e-31	130.00
IUUC-Sar-113096	Sorex araneus	37.93	6.00e-09	53.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence