iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017286

Ensembl Protein ID

Bra039126.1-P

UniProt Accession

M4FDF5; M4FDF5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039126	Bra039126.1	Bra039126.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-30	104.8	209	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sdtllvsGsdDgtikvWD 29
           H+d+v+++a+      +  +++sGs Dg++ +W 
   Q: 209  HKDWVRDVAWapnlglPKSTIASGSEDGSVIIWT 242
           ***********666654445*************6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPPQKIETGH SDIVHDVVMD YYGKRIATAS SDGTIKITGV SNSGGSQQLA TLTGHRGPVW 60
QVAWAHPKYD SLLASCSYDG QIIIWKEGNN NEWTQSHVFT DHKVSVNSIA WAPHELGLSL 120

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Nucleotide Sequence
(Fasta)

ATGCCTCCCC AGAAGATCGA GACAGGTCAC AGCGACATTG TCCACGATGT CGTCATGGAT 60
TACTACGGAA AGCGAATAGC AACTGCCTCA TCAGACGGCA CCATCAAGAT AACCGGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	77.45	7.00e-142	496.00
IUUC-Ath-006810	Arabidopsis thaliana	92.72	2.00e-166	577.00
IUUC-Bdi-014818	Brachypodium distachyon	76.80	3.00e-141	494.00
IUUC-Bol-015572	Brassica oleracea	99.01	7.00e-176	608.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.35	2.00e-70	258.00
IUUC-Hvu-047835	Hordeum vulgare	77.45	4.00e-142	496.00
IUUC-Lpe-051187	Leersia perrieri	78.18	9.00e-146	511.00
IUUC-Obr-076667	Oryza brachyantha	77.78	1.00e-140	492.00
IUUC-Opu-083677	Oryza punctata	78.43	3.00e-142	497.00
IUUC-Pno-094955	Phaeosphaeria nodorum	48.65	2.00e-67	248.00
IUUC-Pte-104267	Pyrenophora teres	48.31	2.00e-69	255.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	47.64	1.00e-63	236.00
IUUC-Tae-124286	Triticum aestivum	78.76	9.00e-144	502.00
IUUC-Tur-126202	Triticum urartu	78.10	6.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence