iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098899

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Peroxisome biogenesis protein 12; Peroxin-12

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_571109; POPTR_0013s04500g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s04500	POPTR_0013s04500.1	POPTR_0013s04500.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	26.60	6.00e-31	131.00	IUUC-Cel-018483
E3 activity/RING/RING	30.29	2.00e-35	147.00	IUUC-Mmu-063239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Functional Description
(View)

Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes.

Protein Sequence
(Fasta)

MLFQVGGQGT RPTFFEMAAA QQLPASLRAA LTYSIGVMAL RRPFLHKVLD CEDEFFSLLM 60
LVLETHSLRT TDASFAESLY GLRRRAVKIR VKKEDARPKS GDGIQHSGLE KHQRILSVVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGAAGGA TAAGGAAGAC ATGGTGTAAT AAAATAAAAC CTCAAAAAAC CCGAACTGAG 60
AAACCGGAAC TGAGAAACCG GAAACAGAAA CCAAATCAAA GAAATCGAAA AGGAGGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0576--Peroxisome
KW-1185--Reference proteome

Interpro

IPR017375--PEX12
IPR006845--Pex_N
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF04757--Pex2_Pex12

Gene Ontology

GO:0005779--C:integral component of peroxisomal membrane
GO:1990429--C:peroxisomal importomer complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0016558--P:protein import into peroxisome matrix
GO:0006513--P:protein monoubiquitination

KEGG

pop:POPTR_0013s04500g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003884	Anas platyrhynchos	27.61	1.00e-14	73.60
IUUC-Ath-007043	Arabidopsis thaliana	76.02	9.00e-175	605.00
IUUC-Ago-007833	Ashbya gossypii	38.10	6.00e-06	44.70
IUUC-Afl-008656	Aspergillus flavus	27.12	6.00e-17	81.60
IUUC-Afu-008808	Aspergillus fumigatus	26.09	6.00e-22	98.20
IUUC-Ang-009803	Aspergillus niger	28.62	1.00e-17	84.00
IUUC-Aor-009984	Aspergillus oryzae	27.12	6.00e-17	81.60
IUUC-Ame-010950	Astyanax mexicanus	27.23	2.00e-17	82.80
IUUC-Bol-015713	Brassica oleracea	72.96	7.00e-159	552.00
IUUC-Bra-017037	Brassica rapa	70.48	4.00e-146	510.00
IUUC-Cel-018483	Caenorhabditis elegans	26.60	3.00e-32	131.00
IUUC-Cja-019601	Callithrix jacchus	29.84	1.00e-30	126.00
IUUC-Cpo-021920	Cavia porcellus	29.35	2.00e-30	126.00
IUUC-Cre-022816	Chlamydomonas reinhardtii	27.23	1.00e-35	144.00
IUUC-Cin-025523	Ciona intestinalis	25.33	4.00e-26	111.00
IUUC-Csv-026141	Ciona savignyi	25.51	1.00e-25	109.00
IUUC-Cgl-026641	Colletotrichum gloeosporioides	33.33	6.00e-12	64.30
IUUC-Dre-027602	Danio rerio	25.46	6.00e-30	124.00
IUUC-Dno-029980	Dasypus novemcinctus	30.23	2.00e-29	122.00
IUUC-Ete-032811	Echinops telfairi	29.25	5.00e-31	127.00
IUUC-Gmo-039567	Gadus morhua	37.21	5.00e-07	48.10
IUUC-Gga-040757	Gallus gallus	26.96	2.00e-31	129.00
IUUC-Gac-042008	Gasterosteus aculeatus	38.95	5.00e-12	64.70
IUUC-Gma-044278	Glycine max	76.34	1.00e-174	604.00
IUUC-Lch-050347	Latimeria chalumnae	28.65	1.00e-33	136.00
IUUC-Loc-052943	Lepisosteus oculatus	35.51	1.00e-13	70.10
IUUC-Lma-053231	Leptosphaeria maculans	24.81	4.00e-20	93.60
IUUC-Mor-057266	Magnaporthe oryzae	24.44	2.00e-11	63.50
IUUC-Mla-058905	Melampsora laricipopulina	28.32	9.00e-35	140.00
IUUC-Mga-059695	Meleagris gallopavo	25.47	2.00e-25	108.00
IUUC-Mmu-063239	Mus musculus	30.29	9.00e-37	147.00
IUUC-Mpu-066866	Mustela putorius furo	30.31	7.00e-27	114.00
IUUC-Nfi-068561	Neosartorya fischeri	26.33	2.00e-21	96.30
IUUC-Ncr-068700	Neurospora crassa	22.63	3.00e-10	59.30
IUUC-Ont-071734	Oreochromis niloticus	30.89	6.00e-19	87.40
IUUC-Ocu-074733	Oryctolagus cuniculus	29.90	2.00e-32	132.00
IUUC-Ola-087150	Oryzias latipes	25.07	2.00e-20	92.80
IUUC-Ppa-095287	Physcomitrella patens	53.85	8.00e-112	396.00
IUUC-Pfo-097238	Poecilia formosa	26.29	4.00e-27	114.00
IUUC-Ppe-101914	Prunus persica	82.95	0.00e+00	668.00
IUUC-Pte-104186	Pyrenophora teres	24.88	4.00e-16	79.00
IUUC-Pyt-104605	Pyrenophora triticirepentis	24.88	2.00e-16	80.10
IUUC-Sja-108008	Schizosaccharomyces japonicus	20.62	3.00e-08	52.40
IUUC-Sly-111409	Solanum lycopersicum	78.88	1.00e-169	588.00
IUUC-Stu-112852	Solanum tuberosum	79.90	5.00e-172	596.00
IUUC-Sre-115089	Sporisorium reilianum	28.62	1.00e-28	120.00
IUUC-Tru-118162	Takifugu rubripes	25.51	3.00e-22	99.00
IUUC-Tni-119962	Tetraodon nigroviridis	25.58	6.00e-22	97.40
IUUC-Tca-121100	Theobroma cacao	83.21	0.00e+00	642.00
IUUC-Ttr-128998	Tursiops truncatus	29.56	8.00e-34	137.00
IUUC-Uma-129524	Ustilago maydis	28.86	1.00e-29	123.00
IUUC-Xtr-132968	Xenopus tropicalis	27.01	1.00e-26	113.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence