iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043804

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000841

Gene Name

LOC100809408; GLYMA_08G345800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G45980	GLYMA08G45980.1	GLYMA08G45980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-30	107.0	77	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+Cp+s+elMrdPv+++sG+tydr  I+kwl+ g++tcP t+q l+++ l+Pn+ +r++i++w + +++
   Q: 77   CPDEFKCPLSKELMRDPVIVASGQTYDRPFIQKWLNAGNRTCPRTHQVLSHTVLTPNHLIREMIEQWSKNQGI 149
           79*****************************************************************998875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKPGVLESD PGVMVKKAKE LKRELQRLVK SIVHDEDCST ETIDQAKETL CVLKELKLRN 60
RSSLSLKLHN KSVASSCPDE FKCPLSKELM RDPVIVASGQ TYDRPFIQKW LNAGNRTCPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGGAGCAT AAAGTCTAGT GAGAGACCGA GAGAGAAAAC AAACTAAGGT GGAGTTATGA 60
GCTTGTTGTG TCTTTATGGT AATGTCCTTG TTTTCCTCTC AACAGTTAAA TGTTACCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100809408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	60.30	1.00e-148	519.00
IUUC-Ath-007457	Arabidopsis thaliana	59.66	1.00e-144	506.00
IUUC-Bol-015599	Brassica oleracea	59.87	3.00e-140	491.00
IUUC-Bra-017223	Brassica rapa	59.14	3.00e-138	484.00
IUUC-Pop-099806	Populus trichocarpa	72.67	0.00e+00	662.00
IUUC-Ppe-101662	Prunus persica	70.93	0.00e+00	629.00
IUUC-Tca-121080	Theobroma cacao	73.39	0.00e+00	674.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence