iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006989

UUCD1 version

UUC-ArT-01630

Ensembl Protein ID

AT3G08700.2

UniProt Accession

Q9C9Y7; UBC12_ARATH

Genbank Protein ID

AAY44852.1; AAG51365.1; AEE74666.1; ANM65238.1; ABD60704.1

Protein Name

Probable ubiquitin-conjugating enzyme E2 12; E2 ubiquitin-conjugating enzyme 12

Genbank Nucleotide ID

DQ027026; AC012562; CP002686; CP002686; BT024821

Gene Name

UBC12; At3g08700; F17O14.17

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G08700	AT3G08700.2	AT3G08700.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.40e-53	179.7	5	140

Active Site

Position(s)	Description	Evidence
86	Glycyl thioester intermediate	{ECO:0000255\|PROSITE-ProRule:PRU00388, ECO:0000255\|PROSITE-ProRule:PRU10133}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsv 98
           R+ +el +++++pp+++sa+pv e+d+++w+++i+Gp+d+pY ggvF ++i+f++dYPfkPPkv+f tk++hPn++++G++Cl+ilk  e+Wspa + 
   Q: 5    RISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILK--EQWSPAPTT 100
           899***********************************************************************************9..********* PP
   S: 99   esvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++vllsi+sll++pnp++pl  e+a+l+k ++++y+++++
   Q: 101  SKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQ 140
           ************************************9986 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.

Protein Sequence
(Fasta)

MASKRISREL RDMQRHPPAN CSAGPVAEED IFHWQATIMG PHDSPYSGGV FTVSIDFSSD 60
YPFKPPKVNF KTKVYHPNID SKGSICLDIL KEQWSPAPTT SKVLLSICSL LTDPNPNDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGTGTGTT GCTTATCTCG TCCGCAGGTT TTCGAGTCTA AAAGCATGGC TTCTAAGAGG 60
ATTTCAAGGG AACTGAGGGA TATGCAGAGA CATCCTCCAG CAAACTGTAG CGCAGGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0016740--F:transferase activity
GO:0016567--P:protein ubiquitination

KEGG

ath:AT3G08700

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence