iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006434

Ensembl Protein ID

fgenesh2_kg.3__919__AT3G09080.1

UniProt Accession

D7L7R3; D7L7R3_ARALL

Genbank Protein ID

EFH60970.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_478218

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__919__AT3G09080.1	fgenesh2_kg.3__919__AT3G09080.1	fgenesh2_kg.3__919__AT3G09080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-17	63.9	592	623
UBD/Beta-Prp	4.70e-42	144.8	372	636

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH + vt++ f +d ++++s + Dg i vW l
   Q: 592  GHGEAVTGVIFlPDcKHIISVASDGCIFVWKL 623
           8***********999***************96 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrdgtikvwdvttgkl..........lrslsgheaevtavkfspdgk...ilvtgseDrtikvwdls 82
           +s+d+++la+g   g + ++d+++  +          ++sls  +++ ++v+ ++ ++   +lv+g++ r+i+++d++
   Q: 372  VSEDGKYLAAGDCGGNLHIYDLQESEYtcftdaheaeIQSLSFSSPGLKDVDSENASSsdfLLVSGGKGRAIHIYDVK 449
           589*********************9999999999999999999999999999999888889****************9 PP
   S: 83   .tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvs 154
            ++++v ++   ++ v+s++f  +g+k+++ ++ + ++++d+  +  +       +++  +g++  vvv+p++ l+v+
   Q: 450  rNFDPVGSVC-GSAAVTSVKFACNGQKMLTSGA-DRLQLFDVVRKASSVRlspshPKTLSHGTIYDVVVDPTSGLVVT 525
           99********.899***********99998665.568*****999999999999999********************* PP
   S: 155  GslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs 231
            + D++++++d+ +gkl+r + +  ++++  ++++d++  +lv    ++t+ ++d+ tge v + +gh + v+ v f+
   Q: 526  VGQDKKINIFDIGSGKLVRSFkQDRDHGDPLKVILDPSYSYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFL 603
           *********************6444555556677******************************************** PP
   S: 232  pnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           p+ ++++s++sDg i++W l  +  ++ +q  n
   Q: 604  PDCKHIISVASDGCIFVWKLPLRMATRIIQAVN 636
           ******************776666666666555 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKLSQKLKKP SSSTKLILQE IIGLTTTNAN GLASVTCSSK CVYLAGCVVV VYDVGSFTQS 60
HLVVSHRMPK PLSCVAVSQN GRFVAAGERT RSSKVGSLAF HGKQTDNGFQ KGNSFVSVVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTAA GCCAGAAATT AAAGAAGCCT AGTTCATCCA CCAAGGTACG TCTTATCAAT 60
GCACTTGCTC TCACCAAATC TCGAGGCAAA TGTATTCAAT TTTTGTTTTT TTTTTTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_478218

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001604	Ailuropoda melanoleuca	31.55	1.00e-57	218.00
IUUC-Atr-003165	Amborella trichopoda	40.41	4.00e-151	528.00
IUUC-Apl-003236	Anas platyrhynchos	28.12	2.00e-61	231.00
IUUC-Aca-004486	Anolis carolinensis	28.73	5.00e-62	232.00
IUUC-Ath-007624	Arabidopsis thaliana	88.04	0.00e+00	1663.00
IUUC-Afu-008757	Aspergillus fumigatus	20.14	8.00e-10	58.90
IUUC-Ame-010799	Astyanax mexicanus	29.89	6.00e-72	265.00
IUUC-Bgr-012083	Blumeria graminis	23.93	7.00e-12	65.90
IUUC-Bta-013041	Bos taurus	31.58	2.00e-58	221.00
IUUC-Bci-013828	Botrytis cinerea	24.78	6.00e-15	75.90
IUUC-Bol-016347	Brassica oleracea	77.68	0.00e+00	1422.00
IUUC-Bra-017959	Brassica rapa	77.09	0.00e+00	1418.00
IUUC-Cel-018592	Caenorhabditis elegans	26.67	1.00e-21	99.40
IUUC-Cja-018986	Callithrix jacchus	30.69	4.00e-57	216.00
IUUC-Cfa-020896	Canis familiaris	31.58	1.00e-58	221.00
IUUC-Cpo-021348	Cavia porcellus	31.60	9.00e-58	218.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	27.45	1.00e-13	71.20
IUUC-Csa-023118	Chlorocebus sabaeus	31.46	1.00e-57	218.00
IUUC-Cho-024310	Choloepus hoffmanni	30.35	6.00e-51	195.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	26.44	3.00e-13	70.50
IUUC-Dre-028678	Danio rerio	28.15	7.00e-68	252.00
IUUC-Dno-029772	Dasypus novemcinctus	31.50	1.00e-60	228.00
IUUC-Dor-030615	Dipodomys ordii	31.60	6.00e-58	219.00
IUUC-Dme-032179	Drosophila melanogaster	27.87	1.00e-52	202.00
IUUC-Ete-033108	Echinops telfairi	31.73	2.00e-58	221.00
IUUC-Eca-033836	Equus caballus	31.40	1.00e-56	215.00
IUUC-Eeu-035189	Erinaceus europaeus	29.26	8.00e-52	199.00
IUUC-Fca-036471	Felis catus	31.47	5.00e-57	216.00
IUUC-Fal-037354	Ficedula albicollis	28.48	4.00e-61	230.00
IUUC-Gmo-039644	Gadus morhua	29.38	1.00e-47	184.00
IUUC-Ggr-039729	Gaeumannomyces graminis	24.94	8.00e-13	68.90
IUUC-Gac-042193	Gasterosteus aculeatus	31.40	2.00e-59	224.00
IUUC-Gma-043644	Glycine max	44.67	5.00e-158	551.00
IUUC-Ggo-045532	Gorilla gorilla	31.16	5.00e-57	216.00
IUUC-Hsa-046352	Homo sapiens	31.46	1.00e-57	218.00
IUUC-Itr-048210	Ictidomys tridecemlineatus	31.35	2.00e-57	218.00
IUUC-Lch-049669	Latimeria chalumnae	31.12	2.00e-57	217.00
IUUC-Loc-052488	Lepisosteus oculatus	29.82	5.00e-70	259.00
IUUC-Lma-053327	Leptosphaeria maculans	25.74	5.00e-11	63.20
IUUC-Laf-053885	Loxodonta africana	32.00	3.00e-57	217.00
IUUC-Mcc-055747	Macaca mulatta	31.80	1.00e-57	218.00
IUUC-Meu-056200	Macropus eugenii	30.61	3.00e-52	200.00
IUUC-Mor-057027	Magnaporthe oryzae	26.35	1.00e-11	64.70
IUUC-Mtr-058383	Medicago truncatula	48.15	1.00e-61	230.00
IUUC-Mga-059325	Meleagris gallopavo	28.53	5.00e-61	229.00
IUUC-Mmr-061305	Microcebus murinus	31.85	1.00e-58	221.00
IUUC-Mdo-063076	Monodelphis domestica	31.94	1.00e-58	221.00
IUUC-Mmu-064319	Mus musculus	28.96	4.00e-58	219.00
IUUC-Mpu-066443	Mustela putorius furo	31.60	5.00e-58	219.00
IUUC-Mlu-068153	Myotis lucifugus	31.40	2.00e-57	217.00
IUUC-Ncr-068758	Neurospora crassa	28.06	7.00e-12	65.90
IUUC-Nle-069578	Nomascus leucogenys	31.44	9.00e-59	222.00
IUUC-Opr-070721	Ochotona princeps	31.47	2.00e-57	217.00
IUUC-Ont-072247	Oreochromis niloticus	31.94	9.00e-60	225.00
IUUC-Oan-073644	Ornithorhynchus anatinus	30.51	3.00e-57	216.00
IUUC-Ocu-073900	Oryctolagus cuniculus	31.41	2.00e-57	217.00
IUUC-Ola-087185	Oryzias latipes	30.62	1.00e-57	218.00
IUUC-Oga-088733	Otolemur garnettii	31.47	1.00e-57	218.00
IUUC-Oar-089569	Ovis aries	31.58	2.00e-58	221.00
IUUC-Ptr-090553	Pan troglodytes	30.24	6.00e-54	206.00
IUUC-Pan-092735	Papio anubis	31.52	3.00e-58	220.00
IUUC-Psi-093710	Pelodiscus sinensis	32.11	7.00e-61	228.00
IUUC-Pma-094285	Petromyzon marinus	30.94	8.00e-61	227.00
IUUC-Pno-094837	Phaeosphaeria nodorum	22.66	3.00e-07	50.40
IUUC-Ppa-095596	Physcomitrella patens	36.12	6.00e-108	385.00
IUUC-Pfo-096129	Poecilia formosa	29.53	4.00e-61	229.00
IUUC-Pab-098737	Pongo abelii	31.46	2.00e-57	218.00
IUUC-Pop-099155	Populus trichocarpa	45.91	2.00e-164	573.00
IUUC-Pca-100959	Procavia capensis	30.64	3.00e-45	177.00
IUUC-Pva-102895	Pteropus vampyrus	30.72	1.00e-56	214.00
IUUC-Rno-105509	Rattus norvegicus	31.94	4.00e-57	216.00
IUUC-Sha-106946	Sarcophilus harrisii	31.81	8.00e-60	225.00
IUUC-Smo-109134	Selaginella moellendorffii	34.40	3.00e-108	386.00
IUUC-Sly-110969	Solanum lycopersicum	46.23	1.00e-142	499.00
IUUC-Stu-112838	Solanum tuberosum	48.86	2.00e-127	449.00
IUUC-Sar-113261	Sorex araneus	30.72	8.00e-52	199.00
IUUC-Ssc-116302	Sus scrofa	31.66	2.00e-57	218.00
IUUC-Tgu-117055	Taeniopygia guttata	28.80	2.00e-61	230.00
IUUC-Tru-118280	Takifugu rubripes	30.92	5.00e-59	222.00
IUUC-Tsy-118799	Tarsius syrichta	28.57	2.00e-19	91.30
IUUC-Tni-120667	Tetraodon nigroviridis	30.26	1.00e-51	197.00
IUUC-Tca-121475	Theobroma cacao	40.21	0.00e+00	632.00
IUUC-Tbe-128005	Tupaia belangeri	31.65	4.00e-58	219.00
IUUC-Ttr-128722	Tursiops truncatus	28.95	7.00e-45	176.00
IUUC-Vpa-130392	Vicugna pacos	46.97	2.00e-14	74.30
IUUC-Vvi-131035	Vitis vinifera	49.40	0.00e+00	651.00
IUUC-Xtr-132966	Xenopus tropicalis	29.59	1.00e-59	225.00
IUUC-Xma-134011	Xiphophorus maculatus	31.07	3.00e-61	230.00
IUUC-Yli-134437	Yarrowia lipolytica	21.92	1.00e-10	62.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence