iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0031374	FBtr0309828	FBpp0301564
FBgn0031374	FBtr0113011	FBpp0111924
FBgn0031374	FBtr0333007	FBpp0305222
FBgn0031374	FBtr0110883	FBpp0110183
FBgn0031374	FBtr0333006	FBpp0305221
FBgn0031374	FBtr0077811	FBpp0077488
FBgn0031374	FBtr0110882	FBpp0110182

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-29	99.6	718	749
UBD/Beta-Prp	2.00e-58	198.0	503	757

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ vt+l+f +d ++l+s+s+Dg i +W +
   Q: 718  GHSELVTGLKFtNDcRHLISASGDGCIFIWQV 749
           8***********999***************87 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...ilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsg 106
           ++c+k+sp+ ++la+g r g i+v+++ +  ll +++ he+ev ++++s+++    +l+++s+Dr+i+v+d+  ++  ++tl  h++s++s++f   g
   Q: 503  VRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCLEYSNEKIerkLLASASRDRLIHVFDVAqNYLLLQTLDDHSSSITSIKFVGAG 600
           689**********************************************9964666**************987589999*****************55 PP
   S: 107  ..dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsl 200
               ++s ++d+ i+    + +  ++ t++  + +   ++v+++++ + +++ Dr vr++  +++k  +t++g h d    ++  +d++g ++++  +
   Q: 601  lnFQMISCGADKSIMFRSFQGNIFMRGTNTSGKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKlsLDPSGIYVATSCT 698
           43789*********9987888888888999999999***********************************888887777666669************ PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
           d+t+ ++d+ ++ec+ ++ gh++ v+ ++f+++  +l+s+s Dg i+iW + ++ ++++
   Q: 699  DKTLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTM 757
           *************************************************9888877665 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MTPASLSAST PTLSTLHHQR MALQSQSQSP LASPLTPSPS SVFGSPKFPA NYERSEKIKL 60
KKVLGLTVCS NAALDVSPVS GLLAYPAGCT VVLFNAKRQT QAYLVNTSRK AFTSVAFSRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTATCGAT ATCGATTTGC AGCCACCTCT AGTTTGTTTG GGGCATTTGG GGCTCCAAGC 60
GGCAAAGCGC CTCCAAAATT TCGCAGCGTC GGACGTGTTT CGCTCCCCGT TCGCCGTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0031021--C:interphase microtubule organizing center
GO:0072686--C:mitotic spindle
GO:0071011--C:precatalytic spliceosome
GO:0000922--C:spindle pole
GO:0005682--C:U5 snRNP
GO:0007052--P:mitotic spindle organization
GO:0007346--P:regulation of mitotic cell cycle
GO:0008380--P:RNA splicing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001604	Ailuropoda melanoleuca	51.68	0.00e+00	748.00
IUUC-Atr-003165	Amborella trichopoda	30.08	2.00e-108	386.00
IUUC-Apl-003236	Anas platyrhynchos	51.17	0.00e+00	763.00
IUUC-Aca-004486	Anolis carolinensis	49.72	0.00e+00	722.00
IUUC-Aly-006434	Arabidopsis lyrata	26.87	4.00e-53	202.00
IUUC-Ath-007624	Arabidopsis thaliana	27.59	5.00e-85	308.00
IUUC-Acl-008257	Aspergillus clavatus	22.44	9.00e-19	88.60
IUUC-Afl-008426	Aspergillus flavus	23.47	4.00e-20	93.20
IUUC-Afu-008757	Aspergillus fumigatus	23.76	3.00e-36	146.00
IUUC-Aor-009966	Aspergillus oryzae	23.47	4.00e-20	93.20
IUUC-Ate-010425	Aspergillus terreus	23.01	8.00e-28	118.00
IUUC-Ame-011306	Astyanax mexicanus	48.25	0.00e+00	687.00
IUUC-Bgr-012083	Blumeria graminis	24.48	2.00e-25	110.00
IUUC-Bta-013041	Bos taurus	51.97	0.00e+00	756.00
IUUC-Bci-013828	Botrytis cinerea	23.33	3.00e-21	97.10
IUUC-Bol-016347	Brassica oleracea	29.25	2.00e-87	317.00
IUUC-Bra-017959	Brassica rapa	29.33	7.00e-89	321.00
IUUC-Cel-018592	Caenorhabditis elegans	27.12	2.00e-75	277.00
IUUC-Cja-018986	Callithrix jacchus	51.10	0.00e+00	753.00
IUUC-Cfa-020896	Canis familiaris	51.97	0.00e+00	757.00
IUUC-Cpo-021348	Cavia porcellus	51.67	0.00e+00	748.00
IUUC-Csa-023118	Chlorocebus sabaeus	51.12	0.00e+00	745.00
IUUC-Cho-024310	Choloepus hoffmanni	46.59	4.00e-132	464.00
IUUC-Cin-025412	Ciona intestinalis	44.63	2.00e-43	167.00
IUUC-Csv-026079	Ciona savignyi	36.67	2.00e-57	214.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	22.14	3.00e-23	103.00
IUUC-Dre-028678	Danio rerio	47.78	0.00e+00	743.00
IUUC-Dno-029772	Dasypus novemcinctus	51.39	0.00e+00	762.00
IUUC-Dor-030615	Dipodomys ordii	51.68	0.00e+00	750.00
IUUC-Dse-031501	Dothistroma septosporum	24.63	5.00e-23	102.00
IUUC-Ete-033108	Echinops telfairi	50.85	0.00e+00	730.00
IUUC-Eca-033836	Equus caballus	51.54	0.00e+00	748.00
IUUC-Eeu-035189	Erinaceus europaeus	48.45	0.00e+00	673.00
IUUC-Fca-036471	Felis catus	51.40	0.00e+00	750.00
IUUC-Fal-037354	Ficedula albicollis	50.61	0.00e+00	757.00
IUUC-Fox-037952	Fusarium oxysporum	28.57	4.00e-15	76.60
IUUC-Fso-038440	Fusarium solani	20.43	6.00e-26	112.00
IUUC-Gmo-039644	Gadus morhua	43.42	2.00e-165	575.00
IUUC-Ggr-039729	Gaeumannomyces graminis	22.62	2.00e-27	117.00
IUUC-Gga-040202	Gallus gallus	50.68	1.00e-76	279.00
IUUC-Gac-042491	Gasterosteus aculeatus	45.59	1.00e-177	616.00
IUUC-Gma-043644	Glycine max	27.88	6.00e-89	322.00
IUUC-Ggo-045532	Gorilla gorilla	50.84	0.00e+00	737.00
IUUC-Hsa-046352	Homo sapiens	51.40	0.00e+00	747.00
IUUC-Itr-048210	Ictidomys tridecemlineatus	51.54	0.00e+00	749.00
IUUC-Kpa-049269	Komagataella pastoris	25.00	4.00e-14	72.80
IUUC-Lch-049450	Latimeria chalumnae	49.63	0.00e+00	687.00
IUUC-Loc-052784	Lepisosteus oculatus	48.64	0.00e+00	696.00
IUUC-Lma-053327	Leptosphaeria maculans	29.74	1.00e-18	88.20
IUUC-Laf-053885	Loxodonta africana	51.68	0.00e+00	751.00
IUUC-Mcc-055747	Macaca mulatta	51.12	0.00e+00	710.00
IUUC-Meu-056200	Macropus eugenii	49.34	0.00e+00	667.00
IUUC-Mor-057027	Magnaporthe oryzae	22.11	2.00e-24	107.00
IUUC-Mtr-058383	Medicago truncatula	28.57	8.00e-40	157.00
IUUC-Mga-059325	Meleagris gallopavo	50.82	0.00e+00	754.00
IUUC-Mmr-061305	Microcebus murinus	51.97	0.00e+00	753.00
IUUC-Mdo-063007	Monodelphis domestica	49.37	0.00e+00	731.00
IUUC-Mmu-064319	Mus musculus	51.41	0.00e+00	753.00
IUUC-Mpu-066443	Mustela putorius furo	51.83	0.00e+00	756.00
IUUC-Mlu-068153	Myotis lucifugus	50.98	0.00e+00	743.00
IUUC-Nfi-068613	Neosartorya fischeri	23.62	3.00e-36	146.00
IUUC-Ncr-068758	Neurospora crassa	23.19	2.00e-27	117.00
IUUC-Nle-069578	Nomascus leucogenys	51.55	0.00e+00	749.00
IUUC-Opr-070721	Ochotona princeps	51.40	0.00e+00	749.00
IUUC-Ont-072247	Oreochromis niloticus	48.21	0.00e+00	699.00
IUUC-Oan-073644	Ornithorhynchus anatinus	48.21	0.00e+00	637.00
IUUC-Ocu-073900	Oryctolagus cuniculus	51.54	0.00e+00	749.00
IUUC-Ola-087185	Oryzias latipes	46.75	0.00e+00	677.00
IUUC-Oga-088733	Otolemur garnettii	51.40	0.00e+00	746.00
IUUC-Oar-089569	Ovis aries	51.97	0.00e+00	756.00
IUUC-Ptr-090553	Pan troglodytes	47.75	0.00e+00	724.00
IUUC-Pan-092735	Papio anubis	50.83	0.00e+00	753.00
IUUC-Psi-093457	Pelodiscus sinensis	50.76	0.00e+00	752.00
IUUC-Pma-094285	Petromyzon marinus	50.90	0.00e+00	752.00
IUUC-Pno-094837	Phaeosphaeria nodorum	22.70	2.00e-31	130.00
IUUC-Ppa-095596	Physcomitrella patens	34.59	1.00e-128	454.00
IUUC-Pfo-096375	Poecilia formosa	46.23	0.00e+00	638.00
IUUC-Pab-098737	Pongo abelii	51.40	0.00e+00	747.00
IUUC-Pop-099155	Populus trichocarpa	28.91	1.00e-87	317.00
IUUC-Pca-100323	Procavia capensis	42.67	3.00e-163	568.00
IUUC-Pva-102895	Pteropus vampyrus	43.72	0.00e+00	730.00
IUUC-Pte-104373	Pyrenophora teres	25.00	2.00e-15	77.40
IUUC-Pyt-104804	Pyrenophora triticirepentis	25.31	1.00e-15	78.60
IUUC-Rno-105509	Rattus norvegicus	51.26	0.00e+00	752.00
IUUC-Sha-106946	Sarcophilus harrisii	51.47	0.00e+00	715.00
IUUC-Ssl-108471	Sclerotinia sclerotiorum	23.10	3.00e-20	93.60
IUUC-Smo-109134	Selaginella moellendorffii	33.61	3.00e-125	442.00
IUUC-Sly-110969	Solanum lycopersicum	26.96	9.00e-77	281.00
IUUC-Stu-112838	Solanum tuberosum	27.60	2.00e-55	209.00
IUUC-Sar-113261	Sorex araneus	48.53	0.00e+00	723.00
IUUC-Ssc-116302	Sus scrofa	51.26	0.00e+00	748.00
IUUC-Tgu-117055	Taeniopygia guttata	51.24	0.00e+00	752.00
IUUC-Tru-118066	Takifugu rubripes	46.01	0.00e+00	638.00
IUUC-Tsy-118799	Tarsius syrichta	42.58	9.00e-116	411.00
IUUC-Tni-120316	Tetraodon nigroviridis	43.10	5.00e-170	590.00
IUUC-Tca-121475	Theobroma cacao	28.54	6.00e-83	302.00
IUUC-Tvi-122281	Trichoderma virens	25.18	4.00e-14	73.20
IUUC-Tme-127128	Tuber melanosporum	23.10	5.00e-36	145.00
IUUC-Tbe-128005	Tupaia belangeri	51.06	3.00e-177	615.00
IUUC-Ttr-128722	Tursiops truncatus	46.01	0.00e+00	667.00
IUUC-Vda-129957	Verticillium dahliae	22.36	5.00e-26	112.00
IUUC-Vpa-130392	Vicugna pacos	49.37	2.00e-43	170.00
IUUC-Vvi-131035	Vitis vinifera	30.74	1.00e-88	320.00
IUUC-Xtr-132966	Xenopus tropicalis	50.27	0.00e+00	709.00
IUUC-Xma-134296	Xiphophorus maculatus	46.80	0.00e+00	671.00
IUUC-Yli-134437	Yarrowia lipolytica	25.74	8.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence