iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131035

UUCD1 version

UUC-ViV-00734

Ensembl Protein ID

VIT_08s0007g01820.t01

UniProt Accession

F6HKX4; F6HKX4_VITVI

Genbank Protein ID

CCB55516.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g01820

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g01820	VIT_08s0007g01820.t01	VIT_08s0007g01820.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-29	101.8	69	106
UBD/Beta-Prp	7.50e-54	183.5	490	709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGs..dDgtikvWDlrtgvl 35
           H+ +v c+af +d ++lvs +  +Dg i +WD+ +g l
   Q: 69   HQYGVVCIAFsPDgKHLVSVGfpHDGYICLWDWQRGLL 106
           9999*******999******************998876 PP

UBD/Beta-Prp

   S: 55   vtavkfspdgkilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirv...wdletgqclee..tlsg 135
            t+ ++++++ +l++g++Dr+i+++d++  +++ v +   h++sv+s+++  +g+k++s s+dr +       + tg +++    +  
   Q: 490  FTSHEIKSHY-FLASGGRDRLIHLYDVErlNFDLVGSADDHSASVTSVKLTSNGSKILSCSADRSLVFrdvAVMATGCKISRrhHQMA 576
           5778899998.******************************************************98844333344444444788889 PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
            +g+v  ++v+p+  + ++ + D++++ +++++gkl++ l + g+ ++  ++++d++ ++lv    ++++ ++d+ tge+v +  gh+
   Q: 577  SHGTVYDMAVDPKLEVAITVGQDKKINTFNIASGKLIKSLkQDGDLGDPIKVTIDPSCTYLVCSYSNKSICMYDFITGEMVAQEMGHS 664
           99999*******99**************************64456666667789**99****************************** PP
   S: 223  dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssv 267
           + ++ v f+p+ ++++s+s D  i++W l ++   ++lq+ ++s+
   Q: 665  EVITGVIFLPDCKHIISVSGDSCIFVWKLPTSLSSRMLQRIKESS 709
           ***************************999999999999888554 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAGYVAVVYN VDSGTQSHLM VSHRMPKPLN CVAVSQDGRF IAAGESGHQP AVLVWDSKTL 60
AFISELKCHQ YGVVCIAFSP DGKHLVSVGF PHDGYICLWD WQRGLLVAKL KSSSSCSAIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGCT ATGTTGCGGT GGTTTACAAT GTGGATTCGG GCACTCAGTC CCATCTCATG 60
GTGTCTCATC GAATGCCAAA GCCTTTGAAC TGTGTTGCTG TCTCGCAGGA TGGGCGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001371	Ailuropoda melanoleuca	34.32	8.00e-109	388.00
IUUC-Atr-003165	Amborella trichopoda	51.23	0.00e+00	863.00
IUUC-Apl-003236	Anas platyrhynchos	34.48	1.00e-106	380.00
IUUC-Aca-004486	Anolis carolinensis	34.34	2.00e-106	380.00
IUUC-Aly-006434	Arabidopsis lyrata	48.81	0.00e+00	630.00
IUUC-Ath-007624	Arabidopsis thaliana	52.47	0.00e+00	854.00
IUUC-Ago-007823	Ashbya gossypii	22.36	1.00e-17	84.30
IUUC-Acl-008257	Aspergillus clavatus	23.24	2.00e-26	113.00
IUUC-Afl-008426	Aspergillus flavus	24.54	4.00e-32	132.00
IUUC-Afu-008757	Aspergillus fumigatus	24.02	6.00e-36	145.00
IUUC-Ani-009489	Aspergillus nidulans	23.74	1.00e-31	131.00
IUUC-Ang-009797	Aspergillus niger	26.77	4.00e-15	76.30
IUUC-Aor-009966	Aspergillus oryzae	24.54	4.00e-32	132.00
IUUC-Ate-010425	Aspergillus terreus	23.99	9.00e-25	108.00
IUUC-Ame-010799	Astyanax mexicanus	35.32	9.00e-118	417.00
IUUC-Bgr-012083	Blumeria graminis	23.82	6.00e-18	85.90
IUUC-Bta-013336	Bos taurus	33.94	6.00e-110	392.00
IUUC-Bci-013828	Botrytis cinerea	25.00	1.00e-41	164.00
IUUC-Bol-016347	Brassica oleracea	50.39	0.00e+00	789.00
IUUC-Bra-017959	Brassica rapa	51.41	0.00e+00	802.00
IUUC-Cel-018592	Caenorhabditis elegans	25.77	5.00e-43	169.00
IUUC-Cja-018986	Callithrix jacchus	34.07	1.00e-104	374.00
IUUC-Cfa-020529	Canis familiaris	34.26	4.00e-109	389.00
IUUC-Cpo-021970	Cavia porcellus	34.31	4.00e-108	385.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	40.96	1.00e-15	78.20
IUUC-Csa-023118	Chlorocebus sabaeus	33.93	1.00e-102	367.00
IUUC-Cho-024310	Choloepus hoffmanni	32.88	3.00e-66	246.00
IUUC-Cin-025412	Ciona intestinalis	42.47	2.00e-26	110.00
IUUC-Csv-026079	Ciona savignyi	28.33	3.00e-30	124.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	26.02	3.00e-17	83.60
IUUC-Dre-028678	Danio rerio	33.42	1.00e-117	417.00
IUUC-Dno-029772	Dasypus novemcinctus	34.49	7.00e-105	375.00
IUUC-Dor-030615	Dipodomys ordii	34.36	4.00e-102	365.00
IUUC-Dse-031501	Dothistroma septosporum	25.23	1.00e-35	144.00
IUUC-Dme-032179	Drosophila melanogaster	31.01	9.00e-91	328.00
IUUC-Ete-033108	Echinops telfairi	34.46	2.00e-101	363.00
IUUC-Eca-033675	Equus caballus	33.52	1.00e-105	377.00
IUUC-Eeu-035189	Erinaceus europaeus	32.02	9.00e-88	318.00
IUUC-Fca-035826	Felis catus	33.89	1.00e-108	387.00
IUUC-Fal-037354	Ficedula albicollis	34.89	1.00e-106	381.00
IUUC-Fox-037952	Fusarium oxysporum	24.65	2.00e-13	70.90
IUUC-Fso-038440	Fusarium solani	23.51	3.00e-27	116.00
IUUC-Gmo-039644	Gadus morhua	32.84	4.00e-85	309.00
IUUC-Ggr-039729	Gaeumannomyces graminis	26.11	1.00e-16	81.30
IUUC-Gga-040202	Gallus gallus	30.19	4.00e-26	111.00
IUUC-Gac-042491	Gasterosteus aculeatus	32.97	6.00e-87	315.00
IUUC-Gma-043644	Glycine max	55.60	0.00e+00	919.00
IUUC-Ggo-045152	Gorilla gorilla	33.24	4.00e-102	365.00
IUUC-Hsa-046352	Homo sapiens	34.17	7.00e-102	365.00
IUUC-Itr-048019	Ictidomys tridecemlineatus	34.31	1.00e-109	389.00
IUUC-Kpa-049269	Komagataella pastoris	34.15	5.00e-11	62.80
IUUC-Lch-049450	Latimeria chalumnae	33.20	8.00e-102	364.00
IUUC-Loc-052784	Lepisosteus oculatus	33.69	8.00e-105	375.00
IUUC-Lma-053327	Leptosphaeria maculans	24.91	1.00e-38	154.00
IUUC-Laf-053992	Loxodonta africana	34.03	6.00e-109	388.00
IUUC-Mcc-055747	Macaca mulatta	33.38	3.00e-96	346.00
IUUC-Meu-056200	Macropus eugenii	34.18	5.00e-96	345.00
IUUC-Mtr-058383	Medicago truncatula	59.50	2.00e-132	464.00
IUUC-Mga-059325	Meleagris gallopavo	34.47	3.00e-106	379.00
IUUC-Mmr-060693	Microcebus murinus	33.80	3.00e-109	389.00
IUUC-Mdo-063007	Monodelphis domestica	33.24	1.00e-104	374.00
IUUC-Mmu-064067	Mus musculus	33.80	2.00e-107	383.00
IUUC-Mpu-066532	Mustela putorius furo	33.19	9.00e-108	384.00
IUUC-Mlu-068153	Myotis lucifugus	33.89	7.00e-103	368.00
IUUC-Nfi-068613	Neosartorya fischeri	23.06	1.00e-36	148.00
IUUC-Ncr-068758	Neurospora crassa	26.09	4.00e-13	69.70
IUUC-Nle-069578	Nomascus leucogenys	34.18	1.00e-102	367.00
IUUC-Opr-070397	Ochotona princeps	33.33	5.00e-108	385.00
IUUC-Ont-072247	Oreochromis niloticus	34.36	3.00e-106	379.00
IUUC-Oan-073644	Ornithorhynchus anatinus	33.43	5.00e-95	341.00
IUUC-Ocu-074274	Oryctolagus cuniculus	32.83	9.00e-107	381.00
IUUC-Ola-087185	Oryzias latipes	33.74	6.00e-101	362.00
IUUC-Olu-087860	Ostreococcus lucimarinus	30.77	1.00e-14	73.60
IUUC-Oga-088733	Otolemur garnettii	34.35	1.00e-102	368.00
IUUC-Oar-089569	Ovis aries	34.50	4.00e-103	369.00
IUUC-Ptr-090553	Pan troglodytes	33.24	7.00e-102	365.00
IUUC-Pan-092735	Papio anubis	34.07	3.00e-104	373.00
IUUC-Psi-093457	Pelodiscus sinensis	34.35	2.00e-105	376.00
IUUC-Pma-094285	Petromyzon marinus	34.92	2.00e-113	402.00
IUUC-Pno-094837	Phaeosphaeria nodorum	30.09	5.00e-18	85.90
IUUC-Ppa-095596	Physcomitrella patens	43.15	0.00e+00	650.00
IUUC-Pfo-096069	Poecilia formosa	34.49	3.00e-106	378.00
IUUC-Pab-098737	Pongo abelii	34.17	6.00e-102	365.00
IUUC-Pop-099155	Populus trichocarpa	60.49	0.00e+00	999.00
IUUC-Pca-100959	Procavia capensis	33.57	6.00e-56	212.00
IUUC-Pva-102895	Pteropus vampyrus	34.03	6.00e-109	388.00
IUUC-Pte-104373	Pyrenophora teres	26.54	8.00e-16	79.00
IUUC-Pyt-104804	Pyrenophora triticirepentis	26.47	2.00e-15	77.40
IUUC-Rno-105598	Rattus norvegicus	33.80	5.00e-107	382.00
IUUC-Sha-106946	Sarcophilus harrisii	35.06	2.00e-103	370.00
IUUC-Ssl-108471	Sclerotinia sclerotiorum	25.96	3.00e-21	96.70
IUUC-Smo-109134	Selaginella moellendorffii	39.40	9.00e-179	620.00
IUUC-Sly-110969	Solanum lycopersicum	57.87	0.00e+00	832.00
IUUC-Stu-112838	Solanum tuberosum	59.51	2.00e-163	568.00
IUUC-Sar-113261	Sorex araneus	33.80	7.00e-106	378.00
IUUC-Ssc-115317	Sus scrofa	34.49	5.00e-110	392.00
IUUC-Tgu-117055	Taeniopygia guttata	34.76	8.00e-107	381.00
IUUC-Tru-118066	Takifugu rubripes	36.03	4.00e-101	362.00
IUUC-Tsy-118799	Tarsius syrichta	30.84	5.00e-53	202.00
IUUC-Tni-120316	Tetraodon nigroviridis	34.20	1.00e-98	352.00
IUUC-Tca-121475	Theobroma cacao	57.64	0.00e+00	984.00
IUUC-Tvi-122281	Trichoderma virens	22.25	1.00e-23	104.00
IUUC-Tme-127128	Tuber melanosporum	27.11	2.00e-15	77.80
IUUC-Tbe-128005	Tupaia belangeri	32.66	5.00e-75	275.00
IUUC-Ttr-128722	Tursiops truncatus	31.75	3.00e-93	336.00
IUUC-Vda-129957	Verticillium dahliae	26.86	3.00e-17	83.60
IUUC-Vpa-130392	Vicugna pacos	50.00	1.00e-18	87.80
IUUC-Xtr-132966	Xenopus tropicalis	33.79	2.00e-100	360.00
IUUC-Xma-134296	Xiphophorus maculatus	34.27	5.00e-101	362.00
IUUC-Yli-134437	Yarrowia lipolytica	26.79	1.00e-14	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence