iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+++ dg   +vlp C H fh +C+  w       + + +CP+Cr
   Q: 88   CVVCLSELADGdkARVLPsCDHWFHVECIDSW------LQSNSTCPICR 130
           ********55444888888*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKESDAVILI HLGINIVFAF FFFGISAVVV SCIIKCYNTH DDDHDHDNNN DGHVSITIKE 60
RVGIKPYVLR SIPIVDFNTK DFKYVLECVV CLSELADGDK ARVLPSCDHW FHVECIDSWL 120

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Nucleotide Sequence
(Fasta)

ATGAAAGAAT CCGATGCTGT CATTCTAATA CATCTCGGAA TAAATATTGT CTTCGCTTTC 60
TTTTTCTTTG GGATTTCGGC CGTGGTAGTG AGTTGCATCA TTAAATGTTA TAATACTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G14320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005529	Arabidopsis lyrata	72.43	1.00e-62	231.00
IUUC-Bol-016213	Brassica oleracea	52.46	3.00e-43	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence