iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016798

Ensembl Protein ID

Bra021203.1-P

UniProt Accession

M4DXF7; M4DXF7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra021203	Bra021203.1	Bra021203.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-19	69.6	455	487
UBD/Beta-Prp	1.50e-45	156.7	409	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H + v++laf  ++  + +v+++dD+ ikvWDl
   Q: 455  HVGCVNDLAFahPNkQMcVVTCGDDKLIKVWDL 487
           9999********776554799***********7 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++++  +t v++spd++l+ ++++ + i v+ ++   l + l    h + v+++ f +  k    vt+++D++ikvwdls gk ++t++gh+++v+
   Q: 409  KEPSISVTRVAWSPDGNLMGVSFTKHLIHVYAYQGSELRQHLeiDAHVGCVNDLAFAHPNKqmCVVTCGDDKLIKVWDLS-GKKLYTFEGHDAQVY 503
           555566888*****************************777755899*********98888899***************8.6779*********** PP
   S: 99   slsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsf 188
           s+  ++  + +++ s+  d  i+ w  ++     + +++ + + +++ ++ dg+ l+s+++    D+++  W+ + g l rt +g  ++s   ++f
   Q: 504  SICPHQkeNIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQ-WRTTMLYSADGSRLFSCGTskegDSFLVEWNESEGALKRTYQGFRKKSNGVVQF 598
           *****98666***************9888766665666655.88888888889888888864555888999999***********9********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           d ++++ +++++d++vk+wd+ +++ + t+ +     n  ++rf +++++l+++++D+  +i  + +   +l++++ + 
   Q: 599  DTTRNRYLAVGEDNQVKFWDMDNTNLLTTVDAEGglPNLPRLRFNKEGNLLAVTTADNGFKILaNADGLRTLRAYEARS 677
           **************************9999998833455578899*************999954444444444444444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD LKVFATFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTC TGAGCAGAGA GTTAGTGTTC TTGATCCTTC AGTTCTTAGA CGAAGAGAAG 60
TTCAAAGAAT CTGTTCACAA GTAAGTTCTC TTATCTGAGG CTAGATTTGT GTCTGAATAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005503	Arabidopsis lyrata	93.75	0.00e+00	2109.00
IUUC-Ath-006901	Arabidopsis thaliana	93.31	0.00e+00	2119.00
IUUC-Bdi-014677	Brachypodium distachyon	69.76	0.00e+00	1566.00
IUUC-Bol-016487	Brassica oleracea	99.65	0.00e+00	2212.00
IUUC-Hvu-047370	Hordeum vulgare	69.48	0.00e+00	1576.00
IUUC-Lpe-050951	Leersia perrieri	68.29	0.00e+00	1500.00
IUUC-Oba-075415	Oryza barthii	69.63	0.00e+00	1582.00
IUUC-Obr-076726	Oryza brachyantha	70.03	0.00e+00	1605.00
IUUC-Ogl-077810	Oryza glaberrima	69.63	0.00e+00	1582.00
IUUC-Ogu-078090	Oryza glumaepatula	69.63	0.00e+00	1582.00
IUUC-Oin-080158	Oryza indica	69.08	0.00e+00	1571.00
IUUC-Olo-080271	Oryza longistaminata	68.41	0.00e+00	1540.00
IUUC-Ome-081965	Oryza meridionalis	69.54	0.00e+00	1578.00
IUUC-Oni-082421	Oryza nivara	69.54	0.00e+00	1582.00
IUUC-Opu-083912	Oryza punctata	69.54	0.00e+00	1582.00
IUUC-Oru-085201	Oryza rufipogon	69.63	0.00e+00	1582.00
IUUC-Osa-086161	Oryza sativa	69.63	0.00e+00	1582.00
IUUC-Ppe-101491	Prunus persica	75.62	0.00e+00	1736.00
IUUC-Sit-110487	Setaria italica	69.94	0.00e+00	1566.00
IUUC-Sbi-113873	Sorghum bicolor	70.25	0.00e+00	1566.00
IUUC-Tca-121579	Theobroma cacao	75.86	0.00e+00	1662.00
IUUC-Tae-125707	Triticum aestivum	69.03	0.00e+00	1566.00
IUUC-Tur-126477	Triticum urartu	65.28	0.00e+00	1539.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence