iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099064

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_667428; POPTR_0016s05320g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s05320	POPTR_0016s05320.1	POPTR_0016s05320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-35	119.9	77	112
UBD/Beta-Prp	1.90e-49	169.6	5	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht+ v ++ f  d + + sGs Dgt+k+WDlr   +
   Q: 77   HTANVMAVGFqCDgNWMYSGSEDGTVKIWDLRAPGC 112
           9999999999977799***************98777 PP

UBD/Beta-Prp

   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderl 237
           + +l+++s+D t+r+W  k+g++ rt +   +++v+ l+++++++  ++++ +  +kl+d+   + + v+++  ht+nv  v f  +++++
   Q: 5    SVILATASYDHTIRFWEAKSGRCYRTIQY-PDSQVNRLEITPDKR-YLAAAGNPHIKLFDVNsnSPHPVMSYDSHTANVMAVGFQCDGNWM 93
           4789***********************97.************965.55677899********777788*********************** PP
   S: 238  vsgssDgsiriWdlrsgdl 256
           +sgs+Dg+++iWdlr   +
   Q: 94   YSGSEDGTVKIWDLRAPGC 112
           **************97665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTQPSVILAT ASYDHTIRFW EAKSGRCYRT IQYPDSQVNR LEITPDKRYL AAAGNPHIKL 60
FDVNSNSPHP VMSYDSHTAN VMAVGFQCDG NWMYSGSEDG TVKIWDLRAP GCQREYESRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACCCTTT CCTATTACTC CACTGAATCA TGGCTTCTTT TTCGAGCCCA AATGGGAAAG 60
AAATGCAAAA CCCTTCAAAA CCCTAATCCC AAATCGCACA ATATCCACCA TATCCTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031931--C:TORC1 complex
GO:0031932--C:TORC2 complex
GO:0032956--P:regulation of actin cytoskeleton organization
GO:0031929--P:TOR signaling

KEGG

pop:POPTR_0016s05320g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000595	Aegilops tauschii	89.56	3.00e-175	607.00
IUUC-Aml-001813	Ailuropoda melanoleuca	47.62	9.00e-81	292.00
IUUC-Atr-002512	Amborella trichopoda	91.14	2.00e-177	613.00
IUUC-Apl-003495	Anas platyrhynchos	44.91	7.00e-63	233.00
IUUC-Aca-004613	Anolis carolinensis	48.89	2.00e-83	301.00
IUUC-Aly-006340	Arabidopsis lyrata	86.41	9.00e-164	568.00
IUUC-Ath-007273	Arabidopsis thaliana	85.76	2.00e-162	563.00
IUUC-Ago-007737	Ashbya gossypii	55.23	2.00e-100	357.00
IUUC-Acl-008090	Aspergillus clavatus	56.02	1.00e-72	266.00
IUUC-Afl-008490	Aspergillus flavus	50.50	2.00e-52	199.00
IUUC-Afu-009060	Aspergillus fumigatus	54.19	6.00e-66	243.00
IUUC-Ani-009251	Aspergillus nidulans	56.02	2.00e-72	265.00
IUUC-Ang-009528	Aspergillus niger	54.83	2.00e-93	335.00
IUUC-Aor-010005	Aspergillus oryzae	53.63	5.00e-88	317.00
IUUC-Ate-010423	Aspergillus terreus	56.43	5.00e-73	267.00
IUUC-Ame-011752	Astyanax mexicanus	47.94	4.00e-82	297.00
IUUC-Bgr-012299	Blumeria graminis	48.89	2.00e-85	308.00
IUUC-Bta-013007	Bos taurus	48.56	2.00e-81	295.00
IUUC-Bci-013987	Botrytis cinerea	52.88	2.00e-94	338.00
IUUC-Bdi-014082	Brachypodium distachyon	89.56	3.00e-175	606.00
IUUC-Bol-015088	Brassica oleracea	85.76	3.00e-162	563.00
IUUC-Bra-016682	Brassica rapa	61.68	9.00e-119	419.00
IUUC-Cel-018473	Caenorhabditis elegans	24.50	7.00e-30	124.00
IUUC-Cja-019216	Callithrix jacchus	43.66	1.00e-59	222.00
IUUC-Cfa-021229	Canis familiaris	47.94	1.00e-81	296.00
IUUC-Cpo-022270	Cavia porcellus	48.25	3.00e-82	297.00
IUUC-Cre-022742	Chlamydomonas reinhardtii	69.45	7.00e-134	469.00
IUUC-Csa-023275	Chlorocebus sabaeus	48.25	3.00e-82	297.00
IUUC-Cin-025588	Ciona intestinalis	45.11	1.00e-77	282.00
IUUC-Csv-026252	Ciona savignyi	46.06	2.00e-79	288.00
IUUC-Cgl-026418	Colletotrichum gloeosporioides	53.92	3.00e-94	337.00
IUUC-Cne-027013	Cryptococcus neoformans	54.69	4.00e-96	343.00
IUUC-Cme-027131	Cyanidioschyzon merolae	38.23	3.00e-67	248.00
IUUC-Dre-028424	Danio rerio	48.57	5.00e-83	300.00
IUUC-Dno-029327	Dasypus novemcinctus	48.25	3.00e-82	297.00
IUUC-Dor-030186	Dipodomys ordii	58.11	5.00e-49	187.00
IUUC-Dse-031475	Dothistroma septosporum	51.93	4.00e-94	337.00
IUUC-Dme-031826	Drosophila melanogaster	43.87	5.00e-74	270.00
IUUC-Ete-032252	Echinops telfairi	39.58	3.00e-49	188.00
IUUC-Eca-033889	Equus caballus	44.12	4.00e-50	190.00
IUUC-Fca-035989	Felis catus	47.94	1.00e-81	295.00
IUUC-Fal-036637	Ficedula albicollis	48.57	3.00e-83	301.00
IUUC-Fox-038066	Fusarium oxysporum	54.23	1.00e-94	338.00
IUUC-Fso-038288	Fusarium solani	53.61	2.00e-91	328.00
IUUC-Gmo-039477	Gadus morhua	48.57	2.00e-83	301.00
IUUC-Ggr-039990	Gaeumannomyces graminis	55.17	4.00e-96	343.00
IUUC-Gga-040890	Gallus gallus	48.89	6.00e-84	303.00
IUUC-Gac-041502	Gasterosteus aculeatus	48.57	3.00e-83	301.00
IUUC-Gma-043580	Glycine max	94.94	0.00e+00	641.00
IUUC-Ggo-045629	Gorilla gorilla	47.95	9.00e-81	293.00
IUUC-Hsa-045824	Homo sapiens	46.62	4.00e-70	257.00
IUUC-Hvu-047767	Hordeum vulgare	89.87	2.00e-175	607.00
IUUC-Itr-047932	Ictidomys tridecemlineatus	48.25	3.00e-82	297.00
IUUC-Kpa-049173	Komagataella pastoris	56.86	5.00e-104	370.00
IUUC-Lch-049703	Latimeria chalumnae	48.57	5.00e-83	300.00
IUUC-Lpe-050744	Leersia perrieri	80.38	1.00e-152	532.00
IUUC-Loc-052507	Lepisosteus oculatus	47.94	3.00e-82	298.00
IUUC-Lma-053084	Leptosphaeria maculans	53.19	6.00e-92	330.00
IUUC-Laf-053595	Loxodonta africana	47.94	1.00e-81	295.00
IUUC-Mcc-055634	Macaca mulatta	40.76	4.00e-72	264.00
IUUC-Meu-055925	Macropus eugenii	47.33	2.00e-71	261.00
IUUC-Mor-057131	Magnaporthe oryzae	54.55	2.00e-97	348.00
IUUC-Mpo-057524	Magnaporthe poae	53.92	2.00e-94	338.00
IUUC-Mtr-057980	Medicago truncatula	93.99	0.00e+00	637.00
IUUC-Mla-059082	Melampsora laricipopulina	45.81	1.00e-80	293.00
IUUC-Mga-059552	Meleagris gallopavo	45.42	4.00e-64	237.00
IUUC-Mvi-060504	Microbotryum violaceum	51.30	2.00e-85	309.00
IUUC-Mdo-062886	Monodelphis domestica	48.57	3.00e-83	300.00
IUUC-Mmu-063477	Mus musculus	48.25	1.00e-82	299.00
IUUC-Mac-065439	Musa acuminata	91.99	5.00e-177	612.00
IUUC-Mpu-066708	Mustela putorius furo	47.62	9.00e-81	293.00
IUUC-Mlu-067311	Myotis lucifugus	46.32	8.00e-79	286.00
IUUC-Nfi-068294	Neosartorya fischeri	53.11	1.00e-66	246.00
IUUC-Ncr-068811	Neurospora crassa	52.81	2.00e-90	325.00
IUUC-Nle-069632	Nomascus leucogenys	48.25	3.00e-82	297.00
IUUC-Opr-071128	Ochotona princeps	52.81	6.00e-51	192.00
IUUC-Ont-071494	Oreochromis niloticus	47.94	2.00e-82	298.00
IUUC-Oan-073298	Ornithorhynchus anatinus	40.53	1.00e-35	142.00
IUUC-Ocu-073983	Oryctolagus cuniculus	47.94	4.00e-81	293.00
IUUC-Oba-076001	Oryza barthii	79.75	3.00e-152	530.00
IUUC-Obr-076833	Oryza brachyantha	87.03	7.00e-171	592.00
IUUC-Ogl-077680	Oryza glaberrima	86.08	7.00e-169	585.00
IUUC-Ogu-078086	Oryza glumaepatula	79.75	7.00e-152	529.00
IUUC-Oin-079336	Oryza indica	86.08	7.00e-169	585.00
IUUC-Olo-080368	Oryza longistaminata	79.64	7.00e-133	465.00
IUUC-Oni-083046	Oryza nivara	79.75	3.00e-152	530.00
IUUC-Opu-084173	Oryza punctata	79.75	3.00e-152	530.00
IUUC-Oru-084599	Oryza rufipogon	79.75	3.00e-152	530.00
IUUC-Osa-086193	Oryza sativa	86.08	7.00e-169	585.00
IUUC-Ola-087216	Oryzias latipes	48.25	1.00e-82	299.00
IUUC-Olu-087852	Ostreococcus lucimarinus	72.67	6.00e-138	482.00
IUUC-Oga-088840	Otolemur garnettii	47.95	9.00e-81	292.00
IUUC-Oar-089294	Ovis aries	47.16	2.00e-69	254.00
IUUC-Ptr-090565	Pan troglodytes	48.25	3.00e-82	297.00
IUUC-Pan-092175	Papio anubis	48.25	3.00e-82	297.00
IUUC-Psi-093180	Pelodiscus sinensis	45.39	2.00e-64	238.00
IUUC-Pma-094705	Petromyzon marinus	49.52	2.00e-83	301.00
IUUC-Pno-095001	Phaeosphaeria nodorum	50.00	9.00e-83	299.00
IUUC-Ppa-095628	Physcomitrella patens	82.22	1.00e-163	568.00
IUUC-Pfo-097128	Poecilia formosa	48.57	1.00e-82	299.00
IUUC-Pab-098386	Pongo abelii	48.25	3.00e-82	297.00
IUUC-Pca-100971	Procavia capensis	46.98	4.00e-71	260.00
IUUC-Ppe-101871	Prunus persica	96.18	0.00e+00	643.00
IUUC-Pva-102230	Pteropus vampyrus	57.38	8.00e-39	153.00
IUUC-Pgr-103511	Puccinia graminis	44.67	4.00e-79	287.00
IUUC-Ptt-103882	Puccinia triticina	42.22	9.00e-76	276.00
IUUC-Pte-104402	Pyrenophora teres	53.19	4.00e-92	330.00
IUUC-Pyt-104448	Pyrenophora triticirepentis	52.89	1.00e-91	329.00
IUUC-Rno-104880	Rattus norvegicus	47.94	5.00e-82	296.00
IUUC-Sce-106266	Saccharomyces cerevisiae	53.92	1.00e-97	348.00
IUUC-Sha-106966	Sarcophilus harrisii	48.57	3.00e-83	300.00
IUUC-Sja-107797	Schizosaccharomyces japonicus	57.61	6.00e-109	386.00
IUUC-Spo-108366	Schizosaccharomyces pombe	57.28	5.00e-108	383.00
IUUC-Smo-108749	Selaginella moellendorffii	78.86	2.00e-154	537.00
IUUC-Sit-110807	Setaria italica	90.19	2.00e-175	607.00
IUUC-Sly-111879	Solanum lycopersicum	91.88	2.00e-131	460.00
IUUC-Sbi-114551	Sorghum bicolor	89.87	4.00e-175	606.00
IUUC-Sre-114962	Sporisorium reilianum	48.88	1.00e-93	335.00
IUUC-Ssc-115363	Sus scrofa	47.63	2.00e-80	291.00
IUUC-Tgu-116695	Taeniopygia guttata	39.38	1.00e-53	202.00
IUUC-Tru-117999	Takifugu rubripes	47.32	6.00e-82	296.00
IUUC-Tni-119973	Tetraodon nigroviridis	47.62	1.00e-82	299.00
IUUC-Tca-121688	Theobroma cacao	96.19	0.00e+00	640.00
IUUC-Tre-122158	Trichoderma reesei	51.56	1.00e-91	328.00
IUUC-Tvi-122511	Trichoderma virens	52.48	4.00e-93	333.00
IUUC-Tae-124124	Triticum aestivum	89.87	2.00e-175	607.00
IUUC-Tur-126228	Triticum urartu	83.23	8.00e-159	551.00
IUUC-Tme-127100	Tuber melanosporum	59.68	3.00e-107	380.00
IUUC-Uma-129358	Ustilago maydis	50.28	3.00e-95	341.00
IUUC-Vda-129756	Verticillium dahliae	54.06	8.00e-95	339.00
IUUC-Vvi-131581	Vitis vinifera	92.41	3.00e-180	623.00
IUUC-Xtr-132363	Xenopus tropicalis	47.94	4.00e-83	300.00
IUUC-Xma-133857	Xiphophorus maculatus	48.57	1.00e-82	299.00
IUUC-Yli-134368	Yarrowia lipolytica	57.52	2.00e-105	374.00
IUUC-Zma-135854	Zea mays	89.56	2.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence