iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-32	109.7	18	48
UBD/Beta-Prp	6.80e-46	157.7	13	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH d+v++++  +d  ++++s+D ti+vW+l
   Q: 18   GHDDDVRGICVcNDENIATSSRDRTIRVWSL 48
           8*********9999889************97 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.....tgkcvhtlkghedsvlslsfsp.....sgdklvsGshdrtirvwdletgqcleet 132
             +l gh++ v+ ++  +d+  ++t+s+Drti+vw+l+     +++   +l gh++ v  l++ p        +lvsGs d  + vw+l +g+ ++ t
   Q: 13   RCELHGHDDDVRGICVCNDE-NIATSSRDRTIRVWSLDpsdkrKYTSEKILLGHTSFVGPLAWIPptdeyPEGRLVSGSMDTFVFVWNLMNGENIQ-T 108
           55789**************9.6*************66655766777778899*************987644489**********************.* PP
   S: 133  lsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           l+gh+  v++v+++     +vs+s D+t++ W  ++g+l++ +   h+++++ ++  ++g elvsgs d ++klw  +t+  ++tl ghtd+v+ +++
   Q: 109  LKGHQMQVTGVAIDN--EDIVSSSVDQTLKRW--RNGQLVESWDA-HQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAV 198
           **************9..77*************..99*******98.*********99976.9***************999..9*************** PP
   S: 231  spnderlvsgssDgsiriW 249
              d  ++s+s+Dgsir+W
   Q: 199  M-PDLGFLSASHDGSIRLW 216
           *.677788*********** PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVMDIDFNEY KLRCELHGHD DDVRGICVCN DENIATSSRD RTIRVWSLDP SDKRKYTSEK 60
ILLGHTSFVG PLAWIPPTDE YPEGRLVSGS MDTFVFVWNL MNGENIQTLK GHQMQVTGVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTAGTTTT TCTCCTGCAG AGTGTTTCTC CTTCCTCAAG TCACTTTTTG AGTCGCAGCA 60
ATTTGGCGTT TGGTATCTCT CAATCTGCTG CTTCTCCTTC TCAGTCATGG TCATGGATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0009506--C:plasmodesma

KEGG

ath:AT3G18860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	59.21	0.00e+00	888.00
IUUC-Aml-002125	Ailuropoda melanoleuca	32.75	7.00e-112	397.00
IUUC-Atr-002554	Amborella trichopoda	63.07	0.00e+00	941.00
IUUC-Apl-004094	Anas platyrhynchos	32.19	8.00e-103	367.00
IUUC-Aca-004726	Anolis carolinensis	33.17	2.00e-108	385.00
IUUC-Aly-005961	Arabidopsis lyrata	97.23	0.00e+00	1453.00
IUUC-Ago-007772	Ashbya gossypii	29.33	5.00e-73	268.00
IUUC-Acl-008316	Aspergillus clavatus	30.19	3.00e-75	276.00
IUUC-Afl-008532	Aspergillus flavus	31.06	3.00e-90	325.00
IUUC-Afu-008950	Aspergillus fumigatus	30.54	9.00e-87	314.00
IUUC-Ani-009186	Aspergillus nidulans	31.57	1.00e-90	327.00
IUUC-Ang-009575	Aspergillus niger	30.11	5.00e-83	301.00
IUUC-Aor-010086	Aspergillus oryzae	31.06	3.00e-90	325.00
IUUC-Ate-010541	Aspergillus terreus	29.85	6.00e-84	304.00
IUUC-Ame-011633	Astyanax mexicanus	32.37	7.00e-110	390.00
IUUC-Bgr-012292	Blumeria graminis	29.49	1.00e-79	290.00
IUUC-Bta-013218	Bos taurus	32.54	2.00e-113	402.00
IUUC-Bci-013876	Botrytis cinerea	30.53	1.00e-84	306.00
IUUC-Bdi-014810	Brachypodium distachyon	62.10	0.00e+00	955.00
IUUC-Bol-016006	Brassica oleracea	89.46	0.00e+00	1347.00
IUUC-Bra-017593	Brassica rapa	89.72	0.00e+00	1357.00
IUUC-Cel-018703	Caenorhabditis elegans	23.46	2.00e-32	134.00
IUUC-Cja-019270	Callithrix jacchus	32.46	6.00e-113	400.00
IUUC-Cfa-021262	Canis familiaris	32.63	2.00e-112	399.00
IUUC-Cpo-021449	Cavia porcellus	31.23	4.00e-100	358.00
IUUC-Csa-024140	Chlorocebus sabaeus	32.58	2.00e-113	402.00
IUUC-Cho-024923	Choloepus hoffmanni	36.21	2.00e-39	157.00
IUUC-Cin-025373	Ciona intestinalis	29.97	1.00e-91	330.00
IUUC-Csv-026324	Ciona savignyi	30.34	7.00e-87	314.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	26.39	8.00e-69	254.00
IUUC-Cne-026998	Cryptococcus neoformans	28.69	6.00e-50	191.00
IUUC-Cme-027154	Cyanidioschyzon merolae	29.48	3.00e-58	219.00
IUUC-Dre-028674	Danio rerio	32.21	7.00e-110	390.00
IUUC-Dno-028966	Dasypus novemcinctus	32.25	1.00e-112	400.00
IUUC-Dor-030343	Dipodomys ordii	29.24	3.00e-55	209.00
IUUC-Dse-031385	Dothistroma septosporum	29.08	1.00e-77	283.00
IUUC-Dme-032044	Drosophila melanogaster	28.20	1.00e-82	300.00
IUUC-Ete-032506	Echinops telfairi	28.57	3.00e-51	196.00
IUUC-Eca-033547	Equus caballus	32.75	1.00e-113	403.00
IUUC-Eeu-034462	Erinaceus europaeus	37.50	9.00e-41	161.00
IUUC-Fca-035893	Felis catus	32.62	1.00e-111	397.00
IUUC-Fal-037235	Ficedula albicollis	32.33	4.00e-110	391.00
IUUC-Fox-037836	Fusarium oxysporum	28.29	1.00e-83	303.00
IUUC-Fso-038251	Fusarium solani	28.50	1.00e-81	296.00
IUUC-Gmo-038648	Gadus morhua	33.69	4.00e-101	361.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.61	8.00e-81	294.00
IUUC-Gga-040989	Gallus gallus	33.50	3.00e-114	405.00
IUUC-Gac-041344	Gasterosteus aculeatus	31.87	5.00e-97	348.00
IUUC-Gma-043067	Glycine max	71.64	0.00e+00	1118.00
IUUC-Ggo-045009	Gorilla gorilla	34.38	6.00e-94	337.00
IUUC-Hsa-046807	Homo sapiens	32.71	6.00e-113	401.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	32.67	5.00e-114	404.00
IUUC-Kpa-049134	Komagataella pastoris	27.62	4.00e-69	255.00
IUUC-Lch-049597	Latimeria chalumnae	33.90	6.00e-72	264.00
IUUC-Lpe-050821	Leersia perrieri	59.15	0.00e+00	940.00
IUUC-Loc-051849	Lepisosteus oculatus	31.87	4.00e-105	375.00
IUUC-Lma-053297	Leptosphaeria maculans	30.60	4.00e-84	305.00
IUUC-Laf-053495	Loxodonta africana	32.21	1.00e-111	396.00
IUUC-Meu-055983	Macropus eugenii	29.03	8.00e-37	148.00
IUUC-Mor-057006	Magnaporthe oryzae	28.48	7.00e-74	271.00
IUUC-Mpo-057465	Magnaporthe poae	28.04	1.00e-77	283.00
IUUC-Mtr-058374	Medicago truncatula	69.87	0.00e+00	1136.00
IUUC-Mla-058895	Melampsora laricipopulina	33.26	1.00e-59	223.00
IUUC-Mvi-060297	Microbotryum violaceum	31.13	1.00e-87	317.00
IUUC-Mmr-060810	Microcebus murinus	31.09	1.00e-101	363.00
IUUC-Mdo-062671	Monodelphis domestica	32.67	3.00e-113	402.00
IUUC-Mmu-063536	Mus musculus	32.08	5.00e-110	391.00
IUUC-Mac-064902	Musa acuminata	63.49	0.00e+00	1001.00
IUUC-Mpu-066085	Mustela putorius furo	32.88	8.00e-113	400.00
IUUC-Mlu-067907	Myotis lucifugus	35.45	5.00e-87	314.00
IUUC-Nfi-068457	Neosartorya fischeri	28.49	1.00e-64	240.00
IUUC-Ncr-068622	Neurospora crassa	30.45	6.00e-85	308.00
IUUC-Nle-069049	Nomascus leucogenys	32.21	1.00e-108	386.00
IUUC-Opr-071013	Ochotona princeps	34.09	5.00e-24	105.00
IUUC-Ont-071339	Oreochromis niloticus	33.42	2.00e-107	382.00
IUUC-Oan-073353	Ornithorhynchus anatinus	39.47	3.00e-42	164.00
IUUC-Ocu-074625	Oryctolagus cuniculus	32.92	4.00e-115	408.00
IUUC-Oba-075226	Oryza barthii	56.23	0.00e+00	859.00
IUUC-Obr-076875	Oryza brachyantha	60.88	0.00e+00	984.00
IUUC-Ogl-077057	Oryza glaberrima	61.67	0.00e+00	986.00
IUUC-Ogu-078156	Oryza glumaepatula	61.80	0.00e+00	987.00
IUUC-Oin-079373	Oryza indica	61.67	0.00e+00	984.00
IUUC-Olo-080849	Oryza longistaminata	54.01	0.00e+00	702.00
IUUC-Ome-081654	Oryza meridionalis	56.23	0.00e+00	859.00
IUUC-Oni-082221	Oryza nivara	57.03	0.00e+00	875.00
IUUC-Opu-084103	Oryza punctata	57.03	0.00e+00	850.00
IUUC-Oru-084751	Oryza rufipogon	56.10	0.00e+00	856.00
IUUC-Osa-085584	Oryza sativa	61.67	0.00e+00	983.00
IUUC-Ola-086974	Oryzias latipes	30.98	6.00e-105	374.00
IUUC-Oga-088052	Otolemur garnettii	30.06	2.00e-98	353.00
IUUC-Oar-089509	Ovis aries	32.43	2.00e-111	396.00
IUUC-Ptr-090911	Pan troglodytes	32.71	7.00e-113	400.00
IUUC-Pan-092141	Papio anubis	32.30	9.00e-112	397.00
IUUC-Psi-093543	Pelodiscus sinensis	32.75	5.00e-98	351.00
IUUC-Pno-094952	Phaeosphaeria nodorum	29.95	6.00e-84	304.00
IUUC-Ppa-095881	Physcomitrella patens	53.34	0.00e+00	828.00
IUUC-Pfo-096739	Poecilia formosa	30.11	7.00e-98	351.00
IUUC-Pab-098641	Pongo abelii	32.47	6.00e-113	401.00
IUUC-Pop-099493	Populus trichocarpa	70.26	0.00e+00	1114.00
IUUC-Pca-100599	Procavia capensis	29.61	6.00e-89	321.00
IUUC-Ppe-101874	Prunus persica	72.69	0.00e+00	1159.00
IUUC-Pva-103009	Pteropus vampyrus	31.28	4.00e-88	318.00
IUUC-Pgr-103260	Puccinia graminis	31.12	2.00e-77	283.00
IUUC-Ptt-103711	Puccinia triticina	28.09	5.00e-67	248.00
IUUC-Pte-104337	Pyrenophora teres	31.15	4.00e-83	301.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	30.90	6.00e-82	298.00
IUUC-Rno-105273	Rattus norvegicus	32.00	4.00e-111	395.00
IUUC-Sce-106351	Saccharomyces cerevisiae	30.07	4.00e-64	238.00
IUUC-Sha-106758	Sarcophilus harrisii	32.08	1.00e-107	383.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	27.31	5.00e-81	295.00
IUUC-Spo-108093	Schizosaccharomyces pombe	30.59	8.00e-93	333.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	29.83	7.00e-80	291.00
IUUC-Smo-109368	Selaginella moellendorffii	50.33	0.00e+00	758.00
IUUC-Sit-109699	Setaria italica	63.21	0.00e+00	1002.00
IUUC-Sly-111063	Solanum lycopersicum	69.13	0.00e+00	1050.00
IUUC-Sar-113199	Sorex araneus	37.93	1.00e-72	267.00
IUUC-Sbi-114745	Sorghum bicolor	60.90	0.00e+00	964.00
IUUC-Sre-115080	Sporisorium reilianum	34.73	9.00e-77	281.00
IUUC-Ssc-115666	Sus scrofa	32.34	1.00e-112	399.00
IUUC-Tgu-116877	Taeniopygia guttata	32.00	8.00e-109	387.00
IUUC-Tru-117580	Takifugu rubripes	31.27	3.00e-104	372.00
IUUC-Tsy-118946	Tarsius syrichta	32.14	3.00e-103	369.00
IUUC-Tni-119755	Tetraodon nigroviridis	31.31	3.00e-102	365.00
IUUC-Tca-120977	Theobroma cacao	70.63	0.00e+00	1122.00
IUUC-Tre-122217	Trichoderma reesei	29.96	2.00e-84	306.00
IUUC-Tvi-122671	Trichoderma virens	28.12	6.00e-81	295.00
IUUC-Tae-125581	Triticum aestivum	61.84	0.00e+00	985.00
IUUC-Tur-126404	Triticum urartu	41.76	7.00e-77	281.00
IUUC-Tme-126971	Tuber melanosporum	32.64	2.00e-109	389.00
IUUC-Ttr-128173	Tursiops truncatus	33.00	1.00e-113	403.00
IUUC-Uma-129322	Ustilago maydis	28.05	2.00e-82	299.00
IUUC-Vda-129682	Verticillium dahliae	28.32	6.00e-76	278.00
IUUC-Vpa-130607	Vicugna pacos	32.10	4.00e-105	375.00
IUUC-Vvi-131153	Vitis vinifera	70.05	0.00e+00	1109.00
IUUC-Xtr-132208	Xenopus tropicalis	31.93	5.00e-108	384.00
IUUC-Xma-133098	Xiphophorus maculatus	30.35	2.00e-95	342.00
IUUC-Yli-134646	Yarrowia lipolytica	33.12	1.00e-71	263.00
IUUC-Zma-135920	Zea mays	57.62	0.00e+00	940.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence