iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2123__AT3G19040.1	fgenesh2_kg.3__2123__AT3G19040.1	fgenesh2_kg.3__2123__AT3G19040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.40e-09	36.8	561	634

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgip.peqqrLiykGkiLeddktLadyglkdgstihllekk 73
           ++++vksl g+   l+v + ++V+ LK k ++kl +   e +r+ y Gk+Led k+La+ +++++s +hll++k
   Q: 561  MKIVVKSLGGKGSLLHVGREESVSSLKAKASRKLDYKeTEAMRMFYMGKELEDEKSLAEQNVQPNSLVHLLRTK 634
           789********7799**********************999*******************************997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MISRVDYESN DEESDGPELQ VVTEEDHLLP KREYFSAAFS LSSLNSRASV FDDEDYDEDE 60
GQEEKHVPVE KSFDPGEREP VVLLEENHVG YEKEAGILGN KDQMDTGDVQ KEELDDLSEC 120

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Nucleotide Sequence
(Fasta)

ATGATATCTC GTGTAGATTA TGAGAGCAAT GATGAAGAGT CTGATGGGCC TGAACTTCAA 60
GTAGTTACTG AGGAAGATCA TCTACTACCG AAAAGGGAGT ACTTTTCAGC TGCATTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR022591--TFIID_sub1_DUF3591
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50053--UBIQUITIN_2

Pfam

PF00439--Bromodomain
PF12157--DUF3591
PF00240--ubiquitin

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00213--UBQ

Gene Ontology

GO:0016020--C:membrane
GO:0016573--P:histone acetylation
GO:0009416--P:response to light stimulus

KEGG

aly:ARALYDRAFT_479422

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007699	Arabidopsis thaliana	86.47	0.00e+00	2900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence