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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-006987
UUCD1 version UUC-ArT-01518
Ensembl Protein ID AT3G19140.1
UniProt Accession Q9LJL6; Q4FE36; ATL62_ARATH
Genbank Protein ID AAZ14059.1; BAB02954.1; AEE76197.1
Protein Name Putative RING-H2 finger protein ATL62; RING-type E3 ubiquitin transferase ATL62
Genbank Nucleotide ID DQ086855; AP000419; CP002686
Gene Name ATL62; At3g19140; MVI11.4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G19140 AT3G19140.1 AT3G19140.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 20435904
Classification
Family E-value Score Start End
E3 activity/RING/RING 4.20e-05 24.9 79 121
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    C +Cl+ f +d +vlp C+H+fh+d w +CP Cr
   Q: 79 CVVCLSKFidEDKARVLPsCNHCFHFDFTDTW------LHSDYTCPNCR 121
    ********77444899999*************......99********8 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MNEDALEAVR SRTFFAILTV FYSIFRCCLA YCNKGDDDHL IHPSHSLHVI KATGINPSVL 60
LSIPVVSFNA NAFKDNIECV VCLSKFIDED KARVLPSCNH CFHFDFTDTW LHSDYTCPNC 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006987|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
ATGAACGAAG ATGCTCTCGA AGCTGTACGA TCTCGCACAT TCTTCGCGAT TCTGACTGTG 60
TTTTATTCTA TATTTCGTTG TTGTCTTGCT TATTGCAACA AAGGTGACGA TGATCATCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006987|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0048577--P:negative regulation of short-day photoperiodism, flowering
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG ath:AT3G19140
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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