iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098888

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_819888; POPTR_0007s07600g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s07600	POPTR_0007s07600.1	POPTR_0007s07600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-07	31.4	270	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ d++dg  + +l+C+H +h +C+++w       + +  CP C
   Q: 270  CVICRLDYEDGetLTLLSCKHSYHSECINNW------LKINKVCPFC 310
           ****999977666778***************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDNNTKLGS GDSKDNTNSE LQLEENPNLS SNGEQQQQQG GGGGGGEGEG EREGGGPQSQ 60
TSGRTPFTNL SQVDADLALA RTLQEQERAY MMLRMNNDGS DYGSWEAGSY LLDYGDDFGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCAATCAA ACTCTCTCTC TCTCTCTCTC TCTGATTCTT GAATAATTCT TGATTCGATC 60
AAAAATTCAA AATCAAACAC CCCCTTCACA TATCAAACTC TAATTAACGA AAGCAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s07600g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002551	Amborella trichopoda	62.65	2.00e-72	265.00
IUUC-Aly-005825	Arabidopsis lyrata	67.05	7.00e-76	276.00
IUUC-Ath-007389	Arabidopsis thaliana	66.67	8.00e-75	273.00
IUUC-Bdi-014369	Brachypodium distachyon	61.88	5.00e-49	187.00
IUUC-Bol-016013	Brassica oleracea	60.54	4.00e-72	263.00
IUUC-Bra-017837	Brassica rapa	61.83	1.00e-71	262.00
IUUC-Gma-043251	Glycine max	71.97	4.00e-77	280.00
IUUC-Mtr-058625	Medicago truncatula	69.63	9.00e-76	276.00
IUUC-Mac-065545	Musa acuminata	69.06	1.00e-49	189.00
IUUC-Oni-082691	Oryza nivara	60.58	1.00e-34	139.00
IUUC-Ppa-095451	Physcomitrella patens	43.84	1.00e-50	192.00
IUUC-Ppe-102055	Prunus persica	74.03	2.00e-92	331.00
IUUC-Sbi-113812	Sorghum bicolor	47.73	3.00e-57	214.00
IUUC-Tca-121858	Theobroma cacao	72.73	5.00e-85	307.00
IUUC-Vvi-131462	Vitis vinifera	70.99	3.00e-92	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence