iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099650

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KE702846

Gene Name

POPTR_0128s00200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0128s00200	POPTR_0128s00200.1	POPTR_0128s00200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-09	38.8	187	229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+dfkdg   + lp CgH fh++Cl kw        ++ +CP Cr
   Q: 187  CAICLQDFKDGdsMRKLPrCGHYFHLSCLDKW------LATNGSCPNCR 229
           ********88777788888*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMKRWFSGVT KASSRCKEAV SSWVFAAKLE GFGTGLFIRS VLKNSVLAAS TCIFALGGAL 60
VGSIIGAMKG QTTETGFLRG SGVGAVAGAI TAVQLLESIT NGEPLSKVAL LHSLLNGKVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGAAAA GGTGGTTTTC TGGCGTAACA AAAGCTTCTT CTAGGTGTAA AGAGGCCGTT 60
TCTTCGTGGG TTTTTGCAGC AAAGCTAGAG GGTTTTGGAA CTGGACTTTT CATTAGATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0128s00200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005906	Arabidopsis lyrata	44.39	1.00e-41	162.00
IUUC-Ath-006813	Arabidopsis thaliana	48.78	4.00e-41	160.00
IUUC-Gma-042950	Glycine max	48.94	3.00e-43	167.00
IUUC-Mtr-058031	Medicago truncatula	47.19	6.00e-42	163.00
IUUC-Mac-065535	Musa acuminata	50.24	2.00e-49	189.00
IUUC-Olu-087845	Ostreococcus lucimarinus	52.27	3.00e-13	65.50
IUUC-Ppe-101838	Prunus persica	53.71	3.00e-62	231.00
IUUC-Sly-111606	Solanum lycopersicum	54.78	5.00e-59	219.00
IUUC-Stu-112026	Solanum tuberosum	61.58	3.00e-51	193.00
IUUC-Tca-121589	Theobroma cacao	53.38	9.00e-59	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence