iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022640

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

DS496114

Gene Name

CHLREDRAFT_111890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_111890	EDP06657	EDP06657

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.30e-42	145.8	242	610
UBD/Alpha-Helix/UBA	9.30e-15	53.8	507	546

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 144  dlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.....................................slqdcLesftkeeelegenkyy 207
           + F++ l+++++c e + vs +++p   l l+vp +  t+ e                                      ++ cL+ f+ +e +e+   y 
   Q: 242  TAFRFNLQDRVQCGESGAVSYKRQPHSLLMLQVPLEAATNSEavaeyrdrqakrqrlkehgaavvvvaegeeeavlprvPFDACLQRFSGAEVVED---YR 339
           679*******************************99988888999**************************************************7...88 PP
   S: 208  cekckkk.qeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts...................peekqke.............. 274
           +    ++ ++a+k++++ ++P++Li++ +R+ f+ + +  +k++  v++p+ +dl+p  +                    +     +              
   Q: 340  SAALGGRaTTATKTTRFASFPPYLIMQVNRY-FQDKDWTLKKMEVLVDVPDVIDLEPLRAPagpapgevlqpeqqpeqqqQ-----Qqqqpaaaaqpaqpd 434
           88877652679********************.99999********************999999999999999988654330.....245677777778888 PP
   S: 275  ..................................................................................................... 274
                                                                                                                
   Q: 435  palvaglvdmgfgeaacaraaaavsnagleaamewllahledpdindplpapgaapaaaaapaaaaaaaaaeadpekvstlagmgfseehakaalqacsgs 535
           88888888888888888888888888888888888888888888888888888888888888888888888888888899999999999999999999999 PP
   S: 275  ...............................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevk 318
                                          + +YeL++ ++H+G +l +GHYva++k+ +g+W  ++D+kV +++
   Q: 536  leraadwlfnhmddldtavakvrgaapvvdgPGRYELVGFISHMGsNLACGHYVAHIKK-DGRWAIYNDEKVAVSE 610
           99999999999999999******************************************.9***********9873 PP

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +d +k+  l  MGF++e+a+ aL+a++++le+A+++L+++
   Q: 507  ADPEKVSTLAGMGFSEEHAKAALQACSGSLERAADWLFNH 546
           68899999******************************97 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

PADWRCDETG VTENLWLNLS TGFIGSGRKN WDGSGGNGAA LRHFEAGGRK YPLVVKLGTI 60
TPHGADVYSY APDEDDMVED PGLAQHLAHW GIDIMQMEKT EKTMSELQAD LNTGYEFSRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGCGGACT GGCGCTGTGA CGAGACGGGC GTGACGGAGA ACCTGTGGCT CAACCTGTCC 60
ACCGGCTTCA TCGGCTCAGG CCGCAAGGTG CGTATGTGTG TGTGTGTGTG TGTGTGGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50030--UBA
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP

SMART

SM00165--UBA
SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cre:CHLREDRAFT_111890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000394	Aegilops tauschii	41.76	2.00e-121	428.00
IUUC-Aml-002104	Ailuropoda melanoleuca	40.03	6.00e-122	429.00
IUUC-Atr-002580	Amborella trichopoda	36.45	2.00e-103	369.00
IUUC-Apl-003774	Anas platyrhynchos	39.45	1.00e-125	442.00
IUUC-Aca-005368	Anolis carolinensis	39.91	1.00e-125	442.00
IUUC-Aly-005727	Arabidopsis lyrata	39.73	2.00e-117	414.00
IUUC-Ath-006974	Arabidopsis thaliana	40.03	2.00e-118	417.00
IUUC-Ago-007890	Ashbya gossypii	33.56	3.00e-37	148.00
IUUC-Acl-008057	Aspergillus clavatus	31.74	2.00e-75	275.00
IUUC-Afl-008547	Aspergillus flavus	33.73	1.00e-73	269.00
IUUC-Afu-008805	Aspergillus fumigatus	31.21	2.00e-67	248.00
IUUC-Ani-009441	Aspergillus nidulans	29.30	3.00e-62	231.00
IUUC-Ang-009720	Aspergillus niger	32.49	1.00e-69	256.00
IUUC-Aor-010111	Aspergillus oryzae	33.73	1.00e-73	269.00
IUUC-Ate-010531	Aspergillus terreus	30.36	6.00e-65	240.00
IUUC-Ame-011470	Astyanax mexicanus	36.88	7.00e-111	393.00
IUUC-Bgr-012183	Blumeria graminis	32.59	1.00e-68	252.00
IUUC-Bta-013179	Bos taurus	40.23	2.00e-123	434.00
IUUC-Bci-013858	Botrytis cinerea	33.43	7.00e-75	273.00
IUUC-Bdi-014904	Brachypodium distachyon	41.62	3.00e-116	410.00
IUUC-Bol-015296	Brassica oleracea	40.79	2.00e-122	431.00
IUUC-Bra-017619	Brassica rapa	41.24	8.00e-122	429.00
IUUC-Cel-018625	Caenorhabditis elegans	32.16	9.00e-76	276.00
IUUC-Cja-019063	Callithrix jacchus	39.44	1.00e-119	422.00
IUUC-Cfa-020976	Canis familiaris	40.87	3.00e-125	440.00
IUUC-Cpo-022265	Cavia porcellus	40.72	7.00e-125	439.00
IUUC-Csa-024078	Chlorocebus sabaeus	38.09	2.00e-112	398.00
IUUC-Cho-024702	Choloepus hoffmanni	34.30	6.00e-76	276.00
IUUC-Cin-025411	Ciona intestinalis	40.36	2.00e-110	392.00
IUUC-Csv-026347	Ciona savignyi	39.14	1.00e-117	415.00
IUUC-Cgl-026667	Colletotrichum gloeosporioides	35.22	3.00e-74	271.00
IUUC-Cne-026831	Cryptococcus neoformans	32.75	7.00e-70	256.00
IUUC-Cme-027335	Cyanidioschyzon merolae	40.85	3.00e-27	115.00
IUUC-Dre-027982	Danio rerio	39.39	1.00e-110	392.00
IUUC-Dno-029034	Dasypus novemcinctus	39.53	3.00e-123	434.00
IUUC-Dor-030479	Dipodomys ordii	38.48	9.00e-56	210.00
IUUC-Dse-031467	Dothistroma septosporum	33.08	3.00e-72	265.00
IUUC-Dme-032075	Drosophila melanogaster	39.16	2.00e-110	392.00
IUUC-Ete-032865	Echinops telfairi	36.31	4.00e-107	380.00
IUUC-Eca-034059	Equus caballus	39.80	3.00e-120	424.00
IUUC-Eeu-035304	Erinaceus europaeus	40.29	5.00e-123	433.00
IUUC-Fca-035515	Felis catus	39.85	7.00e-122	429.00
IUUC-Fal-037271	Ficedula albicollis	39.42	4.00e-126	443.00
IUUC-Fox-037745	Fusarium oxysporum	35.53	5.00e-73	267.00
IUUC-Fso-038158	Fusarium solani	34.93	4.00e-75	274.00
IUUC-Gmo-039071	Gadus morhua	40.87	1.00e-117	416.00
IUUC-Ggr-040098	Gaeumannomyces graminis	31.83	2.00e-70	258.00
IUUC-Gga-040635	Gallus gallus	38.95	2.00e-124	438.00
IUUC-Gac-042528	Gasterosteus aculeatus	38.85	2.00e-111	394.00
IUUC-Gma-043614	Glycine max	39.14	8.00e-116	409.00
IUUC-Ggo-044602	Gorilla gorilla	40.44	2.00e-123	435.00
IUUC-Hsa-045959	Homo sapiens	40.44	2.00e-123	435.00
IUUC-Hvu-047563	Hordeum vulgare	42.12	7.00e-124	436.00
IUUC-Itr-048712	Ictidomys tridecemlineatus	39.30	8.00e-122	429.00
IUUC-Kpa-049156	Komagataella pastoris	28.74	5.00e-59	220.00
IUUC-Lch-049648	Latimeria chalumnae	41.07	6.00e-123	433.00
IUUC-Lpe-051523	Leersia perrieri	41.73	5.00e-120	423.00
IUUC-Loc-052072	Lepisosteus oculatus	38.26	1.00e-110	392.00
IUUC-Lma-053216	Leptosphaeria maculans	32.97	1.00e-65	243.00
IUUC-Laf-054327	Loxodonta africana	40.09	4.00e-122	430.00
IUUC-Mcc-055443	Macaca mulatta	40.44	2.00e-123	435.00
IUUC-Meu-056298	Macropus eugenii	40.98	8.00e-74	270.00
IUUC-Mor-057106	Magnaporthe oryzae	32.78	6.00e-74	270.00
IUUC-Mpo-057589	Magnaporthe poae	31.25	2.00e-68	251.00
IUUC-Mtr-058680	Medicago truncatula	40.57	8.00e-119	419.00
IUUC-Mla-058903	Melampsora laricipopulina	31.18	6.00e-68	250.00
IUUC-Mga-059669	Meleagris gallopavo	38.93	5.00e-122	430.00
IUUC-Mvi-060476	Microbotryum violaceum	32.35	2.00e-62	232.00
IUUC-Mmr-060575	Microcebus murinus	40.00	1.00e-122	432.00
IUUC-Mdo-062183	Monodelphis domestica	38.88	2.00e-122	431.00
IUUC-Mmu-063592	Mus musculus	40.09	1.00e-122	432.00
IUUC-Mac-065634	Musa acuminata	37.33	4.00e-105	374.00
IUUC-Mpu-066082	Mustela putorius furo	41.02	2.00e-125	441.00
IUUC-Mlu-067345	Myotis lucifugus	39.59	3.00e-120	424.00
IUUC-Nfi-068558	Neosartorya fischeri	31.50	3.00e-76	278.00
IUUC-Ncr-068960	Neurospora crassa	32.44	2.00e-64	238.00
IUUC-Nle-070173	Nomascus leucogenys	41.17	1.00e-125	442.00
IUUC-Opr-070556	Ochotona princeps	39.74	5.00e-124	437.00
IUUC-Ont-071502	Oreochromis niloticus	40.36	2.00e-113	401.00
IUUC-Oan-072959	Ornithorhynchus anatinus	44.44	2.00e-38	150.00
IUUC-Ocu-074861	Oryctolagus cuniculus	40.87	1.00e-126	446.00
IUUC-Oba-075109	Oryza barthii	43.55	2.00e-124	438.00
IUUC-Obr-076292	Oryza brachyantha	41.68	5.00e-119	420.00
IUUC-Ogl-077065	Oryza glaberrima	43.27	6.00e-127	446.00
IUUC-Ogu-078776	Oryza glumaepatula	43.08	6.00e-128	449.00
IUUC-Oin-080048	Oryza indica	43.12	1.00e-125	442.00
IUUC-Olo-080711	Oryza longistaminata	41.35	9.00e-121	426.00
IUUC-Ome-081506	Oryza meridionalis	43.55	3.00e-124	437.00
IUUC-Oni-082320	Oryza nivara	43.55	2.00e-124	437.00
IUUC-Opu-083801	Oryza punctata	43.24	2.00e-118	418.00
IUUC-Oru-085139	Oryza rufipogon	43.24	7.00e-123	432.00
IUUC-Osa-085713	Oryza sativa	43.27	4.00e-127	446.00
IUUC-Ola-086951	Oryzias latipes	37.72	3.00e-106	377.00
IUUC-Olu-087822	Ostreococcus lucimarinus	47.80	1.00e-150	525.00
IUUC-Oga-088625	Otolemur garnettii	38.98	2.00e-120	425.00
IUUC-Oar-089995	Ovis aries	40.03	1.00e-124	439.00
IUUC-Ptr-090640	Pan troglodytes	39.85	3.00e-126	444.00
IUUC-Pan-091974	Papio anubis	39.88	7.00e-122	429.00
IUUC-Psi-093957	Pelodiscus sinensis	39.36	1.00e-130	458.00
IUUC-Pma-094242	Petromyzon marinus	41.94	2.00e-70	257.00
IUUC-Pno-094835	Phaeosphaeria nodorum	34.46	5.00e-70	257.00
IUUC-Ppa-095901	Physcomitrella patens	39.97	2.00e-123	434.00
IUUC-Pfo-097148	Poecilia formosa	40.00	4.00e-113	400.00
IUUC-Pab-098068	Pongo abelii	38.79	3.00e-109	387.00
IUUC-Pop-098855	Populus trichocarpa	39.91	2.00e-114	405.00
IUUC-Pca-100738	Procavia capensis	38.39	2.00e-102	365.00
IUUC-Ppe-101315	Prunus persica	39.49	1.00e-115	409.00
IUUC-Pva-102154	Pteropus vampyrus	39.27	2.00e-117	414.00
IUUC-Pgr-103343	Puccinia graminis	31.00	1.00e-50	192.00
IUUC-Ptt-103928	Puccinia triticina	26.83	6.00e-44	170.00
IUUC-Pte-104306	Pyrenophora teres	32.69	1.00e-66	246.00
IUUC-Pyt-104696	Pyrenophora triticirepentis	33.17	6.00e-68	250.00
IUUC-Rno-105801	Rattus norvegicus	40.38	4.00e-123	434.00
IUUC-Sce-106304	Saccharomyces cerevisiae	27.64	5.00e-55	207.00
IUUC-Sha-107635	Sarcophilus harrisii	38.99	2.00e-122	431.00
IUUC-Sja-107678	Schizosaccharomyces japonicus	30.40	6.00e-57	213.00
IUUC-Spo-108144	Schizosaccharomyces pombe	30.68	5.00e-65	240.00
IUUC-Smo-108848	Selaginella moellendorffii	41.07	3.00e-122	431.00
IUUC-Sit-110728	Setaria italica	42.14	2.00e-127	447.00
IUUC-Sly-111523	Solanum lycopersicum	40.48	8.00e-126	442.00
IUUC-Sar-113733	Sorex araneus	41.54	2.00e-47	182.00
IUUC-Sbi-114419	Sorghum bicolor	41.65	2.00e-126	444.00
IUUC-Sre-115225	Sporisorium reilianum	34.29	5.00e-61	227.00
IUUC-Ssc-115686	Sus scrofa	39.42	9.00e-122	429.00
IUUC-Tgu-117346	Taeniopygia guttata	39.33	6.00e-124	436.00
IUUC-Tru-118350	Takifugu rubripes	38.21	2.00e-110	391.00
IUUC-Tsy-119278	Tarsius syrichta	35.20	1.00e-92	332.00
IUUC-Tni-120658	Tetraodon nigroviridis	39.77	8.00e-108	383.00
IUUC-Tca-121585	Theobroma cacao	38.96	2.00e-111	394.00
IUUC-Tre-122043	Trichoderma reesei	34.49	5.00e-71	260.00
IUUC-Tvi-122303	Trichoderma virens	33.84	4.00e-72	264.00
IUUC-Tae-123798	Triticum aestivum	42.84	4.00e-125	440.00
IUUC-Tur-126732	Triticum urartu	41.92	2.00e-121	428.00
IUUC-Tme-126909	Tuber melanosporum	34.04	3.00e-70	258.00
IUUC-Tbe-127261	Tupaia belangeri	34.70	2.00e-56	212.00
IUUC-Ttr-129119	Tursiops truncatus	34.70	6.00e-56	210.00
IUUC-Uma-129599	Ustilago maydis	31.91	8.00e-63	233.00
IUUC-Vda-129688	Verticillium dahliae	33.03	2.00e-69	255.00
IUUC-Vpa-130170	Vicugna pacos	30.96	2.00e-42	166.00
IUUC-Vvi-131116	Vitis vinifera	40.09	3.00e-114	404.00
IUUC-Xtr-131953	Xenopus tropicalis	39.83	1.00e-120	425.00
IUUC-Xma-133837	Xiphophorus maculatus	40.00	5.00e-113	400.00
IUUC-Yli-134510	Yarrowia lipolytica	32.97	2.00e-81	295.00
IUUC-Zma-135786	Zea mays	40.83	2.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence