iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057838

Ensembl Protein ID

KEH32406

UniProt Accession

A0A072USV0; A0A072USV0_MEDTR

Genbank Protein ID

KEH32406.1

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g123597

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g123597	KEH32406	KEH32406

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-45	150.3	580	619
UBD/Beta-Prp	1.00e-94	318.6	540	698

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v c++  sd +l+v+Gs D++ik+W l+ g++ ks
   Q: 580  GHKLPVLCMDIsSDgDLIVTGSADKNIKIWGLDFGDCHKS 619
           7999********999*********************9875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           +++v+  v++spd +++a++  d+t+k++ v+t k++ sl+gh+ +v ++++s+dg+++vtgs D++ik+w l+ g+c  ++ +h+dsv++++f p+++++
   Q: 540  NDDVLV-VAISPDAKYIAVALLDSTVKIHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSIFAHKDSVMAVQFVPKTHYV 639
           455555.999******************************************************************************************* PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
            s ++dr+++ wd ++ + l  tl+gh++ ++c++v+  g+ +v+Gs Dr +r Wd   +
   Q: 640  FSVGKDRVVKYWDADKFEQLL-TLEGHHADIWCLAVSNRGDFIVTGSHDRSIRRWDRTEE 698
           *********************.**********************************9433 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVKSYLRYEP SVSFGVIASV DSNISYDSSG KHLLSPALEK IGVWHVRQGI CTKTLTPFVP 60
CRGPSLAVTS IASSPSQLIA GGYGDGSIRL WDTDKGTCET TLNGHKGAVT ALRYNKLGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAAGAAAA AATAAACAAG GGGTGTATAT AAAAGAAATT GTGTGCAAAA AGCAACCTAT 60
TATCAGGACA CGAAGGTTTA GAGTAGTAAA AGAAAAGAAG GAAGAAGACG CGCCGAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

KEGG

mtr:MTR_4g123597

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	58.67	0.00e+00	984.00
IUUC-Aml-001245	Ailuropoda melanoleuca	38.32	6.00e-179	620.00
IUUC-Atr-002700	Amborella trichopoda	61.16	0.00e+00	1077.00
IUUC-Apl-004164	Anas platyrhynchos	41.04	8.00e-149	520.00
IUUC-Aca-004765	Anolis carolinensis	38.49	1.00e-180	626.00
IUUC-Aly-006503	Arabidopsis lyrata	67.69	0.00e+00	1231.00
IUUC-Ath-006848	Arabidopsis thaliana	66.81	0.00e+00	1229.00
IUUC-Ago-007909	Ashbya gossypii	32.45	3.00e-141	495.00
IUUC-Acl-008238	Aspergillus clavatus	37.87	4.00e-168	585.00
IUUC-Afl-008544	Aspergillus flavus	36.59	6.00e-161	560.00
IUUC-Afu-008868	Aspergillus fumigatus	38.32	2.00e-166	578.00
IUUC-Ani-009367	Aspergillus nidulans	38.04	1.00e-165	576.00
IUUC-Ang-009732	Aspergillus niger	38.14	8.00e-172	597.00
IUUC-Aor-010140	Aspergillus oryzae	37.04	9.00e-164	570.00
IUUC-Ate-010572	Aspergillus terreus	37.24	1.00e-163	570.00
IUUC-Ame-010956	Astyanax mexicanus	37.71	2.00e-163	569.00
IUUC-Bgr-012296	Blumeria graminis	34.84	2.00e-158	552.00
IUUC-Bta-012716	Bos taurus	38.43	0.00e+00	640.00
IUUC-Bci-013699	Botrytis cinerea	35.85	6.00e-158	550.00
IUUC-Bdi-014525	Brachypodium distachyon	61.52	0.00e+00	1078.00
IUUC-Bol-015117	Brassica oleracea	67.38	0.00e+00	1180.00
IUUC-Bra-016869	Brassica rapa	66.45	0.00e+00	1170.00
IUUC-Cel-018570	Caenorhabditis elegans	29.28	4.00e-98	352.00
IUUC-Cja-019425	Callithrix jacchus	38.35	0.00e+00	633.00
IUUC-Cfa-020787	Canis familiaris	38.54	0.00e+00	627.00
IUUC-Cpo-021729	Cavia porcellus	38.97	2.00e-136	478.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	50.93	1.00e-122	433.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.32	0.00e+00	639.00
IUUC-Cho-024495	Choloepus hoffmanni	36.10	6.00e-98	351.00
IUUC-Cin-025245	Ciona intestinalis	36.38	3.00e-109	388.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.03	1.00e-156	546.00
IUUC-Cne-026835	Cryptococcus neoformans	40.79	4.00e-111	395.00
IUUC-Cme-027162	Cyanidioschyzon merolae	23.93	5.00e-40	159.00
IUUC-Dre-027874	Danio rerio	39.58	0.00e+00	627.00
IUUC-Dno-028905	Dasypus novemcinctus	39.50	0.00e+00	651.00
IUUC-Dor-030383	Dipodomys ordii	35.66	3.00e-76	279.00
IUUC-Dse-031297	Dothistroma septosporum	35.21	4.00e-152	531.00
IUUC-Dme-031956	Drosophila melanogaster	34.64	4.00e-139	488.00
IUUC-Ete-032608	Echinops telfairi	35.77	4.00e-102	364.00
IUUC-Eca-034181	Equus caballus	38.94	0.00e+00	631.00
IUUC-Eeu-034495	Erinaceus europaeus	39.37	2.00e-175	608.00
IUUC-Fca-035994	Felis catus	39.32	7.00e-174	603.00
IUUC-Fal-036611	Ficedula albicollis	38.08	6.00e-177	613.00
IUUC-Fox-037807	Fusarium oxysporum	36.97	4.00e-160	558.00
IUUC-Fso-038090	Fusarium solani	35.76	1.00e-158	553.00
IUUC-Gmo-039018	Gadus morhua	36.78	9.00e-89	320.00
IUUC-Ggr-039748	Gaeumannomyces graminis	35.99	3.00e-161	561.00
IUUC-Gga-040707	Gallus gallus	41.97	2.00e-127	449.00
IUUC-Gac-042334	Gasterosteus aculeatus	34.39	3.00e-82	299.00
IUUC-Gma-043860	Glycine max	86.90	0.00e+00	1507.00
IUUC-Ggo-045334	Gorilla gorilla	38.35	0.00e+00	632.00
IUUC-Hsa-046996	Homo sapiens	38.22	0.00e+00	634.00
IUUC-Hvu-047381	Hordeum vulgare	55.71	3.00e-172	597.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.54	3.00e-180	624.00
IUUC-Kpa-049185	Komagataella pastoris	35.44	8.00e-149	520.00
IUUC-Lch-050098	Latimeria chalumnae	38.30	1.00e-159	556.00
IUUC-Lpe-050710	Leersia perrieri	60.06	0.00e+00	1058.00
IUUC-Loc-052745	Lepisosteus oculatus	38.04	3.00e-167	581.00
IUUC-Lma-053104	Leptosphaeria maculans	37.10	7.00e-167	581.00
IUUC-Laf-054395	Loxodonta africana	39.18	0.00e+00	637.00
IUUC-Mcc-055077	Macaca mulatta	38.53	0.00e+00	634.00
IUUC-Meu-056418	Macropus eugenii	42.89	2.00e-98	353.00
IUUC-Mor-057031	Magnaporthe oryzae	36.37	4.00e-148	518.00
IUUC-Mpo-057420	Magnaporthe poae	35.85	3.00e-157	548.00
IUUC-Mla-058854	Melampsora laricipopulina	35.41	1.00e-145	510.00
IUUC-Mga-060120	Meleagris gallopavo	40.24	2.00e-131	462.00
IUUC-Mvi-060407	Microbotryum violaceum	41.64	5.00e-131	461.00
IUUC-Mmr-060635	Microcebus murinus	39.06	1.00e-180	626.00
IUUC-Mdo-063023	Monodelphis domestica	38.51	0.00e+00	642.00
IUUC-Mmu-064103	Mus musculus	38.75	0.00e+00	647.00
IUUC-Mac-065569	Musa acuminata	65.02	0.00e+00	1203.00
IUUC-Mpu-066462	Mustela putorius furo	38.47	0.00e+00	628.00
IUUC-Mlu-067894	Myotis lucifugus	38.32	0.00e+00	626.00
IUUC-Nfi-068321	Neosartorya fischeri	38.23	2.00e-167	582.00
IUUC-Ncr-068661	Neurospora crassa	35.89	2.00e-158	552.00
IUUC-Nle-069409	Nomascus leucogenys	38.32	0.00e+00	636.00
IUUC-Opr-070445	Ochotona princeps	43.53	6.00e-125	441.00
IUUC-Ont-072339	Oreochromis niloticus	39.05	9.00e-177	613.00
IUUC-Oan-073688	Ornithorhynchus anatinus	38.04	2.00e-174	605.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.64	0.00e+00	640.00
IUUC-Oba-075635	Oryza barthii	60.81	0.00e+00	1024.00
IUUC-Obr-076897	Oryza brachyantha	61.76	0.00e+00	1087.00
IUUC-Ogl-077555	Oryza glaberrima	60.81	0.00e+00	1024.00
IUUC-Ogu-078724	Oryza glumaepatula	60.81	0.00e+00	1031.00
IUUC-Oin-080030	Oryza indica	60.81	0.00e+00	1026.00
IUUC-Olo-080687	Oryza longistaminata	57.36	0.00e+00	979.00
IUUC-Ome-081867	Oryza meridionalis	60.60	0.00e+00	1024.00
IUUC-Oni-082559	Oryza nivara	60.70	0.00e+00	1023.00
IUUC-Opu-083332	Oryza punctata	57.93	0.00e+00	932.00
IUUC-Oru-084455	Oryza rufipogon	60.92	0.00e+00	1028.00
IUUC-Osa-085793	Oryza sativa	60.92	0.00e+00	1028.00
IUUC-Ola-087395	Oryzias latipes	42.93	7.00e-114	404.00
IUUC-Olu-087768	Ostreococcus lucimarinus	44.00	0.00e+00	655.00
IUUC-Oga-088574	Otolemur garnettii	38.74	0.00e+00	631.00
IUUC-Oar-089453	Ovis aries	38.14	0.00e+00	640.00
IUUC-Ptr-090694	Pan troglodytes	38.43	0.00e+00	635.00
IUUC-Pan-092420	Papio anubis	38.24	0.00e+00	629.00
IUUC-Psi-093683	Pelodiscus sinensis	38.91	3.00e-176	611.00
IUUC-Pma-094197	Petromyzon marinus	38.60	2.00e-37	147.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.87	9.00e-164	570.00
IUUC-Ppa-095208	Physcomitrella patens	52.53	0.00e+00	887.00
IUUC-Pfo-096299	Poecilia formosa	38.74	2.00e-180	625.00
IUUC-Pab-098706	Pongo abelii	38.47	0.00e+00	636.00
IUUC-Pop-099275	Populus trichocarpa	73.59	0.00e+00	1302.00
IUUC-Pca-100796	Procavia capensis	32.42	2.00e-121	429.00
IUUC-Ppe-101861	Prunus persica	74.33	0.00e+00	1350.00
IUUC-Pva-103241	Pteropus vampyrus	37.66	9.00e-168	583.00
IUUC-Pgr-103432	Puccinia graminis	35.41	8.00e-144	504.00
IUUC-Ptt-103742	Puccinia triticina	33.77	2.00e-131	462.00
IUUC-Pte-104069	Pyrenophora teres	36.71	5.00e-159	554.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.61	3.00e-165	575.00
IUUC-Rno-105219	Rattus norvegicus	37.91	4.00e-179	621.00
IUUC-Sce-106271	Saccharomyces cerevisiae	34.54	4.00e-142	498.00
IUUC-Sha-107550	Sarcophilus harrisii	37.82	1.00e-177	616.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	35.77	1.00e-157	549.00
IUUC-Spo-108239	Schizosaccharomyces pombe	35.57	7.00e-159	553.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.27	1.00e-160	560.00
IUUC-Smo-108974	Selaginella moellendorffii	55.83	0.00e+00	947.00
IUUC-Sit-110000	Setaria italica	61.27	0.00e+00	1033.00
IUUC-Sly-111595	Solanum lycopersicum	69.71	0.00e+00	1194.00
IUUC-Stu-112516	Solanum tuberosum	70.32	0.00e+00	1196.00
IUUC-Sar-113195	Sorex araneus	37.87	1.00e-156	546.00
IUUC-Sbi-114465	Sorghum bicolor	60.34	0.00e+00	1039.00
IUUC-Sre-115006	Sporisorium reilianum	34.31	1.00e-145	509.00
IUUC-Ssc-115929	Sus scrofa	38.32	0.00e+00	629.00
IUUC-Tgu-117282	Taeniopygia guttata	37.76	8.00e-175	607.00
IUUC-Tru-118406	Takifugu rubripes	38.82	2.00e-172	599.00
IUUC-Tsy-119170	Tarsius syrichta	38.41	5.00e-179	620.00
IUUC-Tni-119721	Tetraodon nigroviridis	38.71	2.00e-168	585.00
IUUC-Tca-121761	Theobroma cacao	75.83	0.00e+00	1376.00
IUUC-Tre-121908	Trichoderma reesei	35.50	3.00e-157	548.00
IUUC-Tvi-122547	Trichoderma virens	36.31	4.00e-160	558.00
IUUC-Tae-125496	Triticum aestivum	60.89	0.00e+00	1060.00
IUUC-Tur-126811	Triticum urartu	63.08	0.00e+00	1030.00
IUUC-Tme-126987	Tuber melanosporum	37.35	6.00e-169	587.00
IUUC-Tbe-127315	Tupaia belangeri	42.94	3.00e-105	375.00
IUUC-Ttr-129165	Tursiops truncatus	34.24	3.00e-142	498.00
IUUC-Uma-129651	Ustilago maydis	33.49	4.00e-145	508.00
IUUC-Vda-129973	Verticillium dahliae	36.28	6.00e-152	531.00
IUUC-Vpa-130163	Vicugna pacos	31.59	8.00e-64	238.00
IUUC-Vvi-131402	Vitis vinifera	75.21	0.00e+00	1318.00
IUUC-Xtr-132296	Xenopus tropicalis	39.01	1.00e-178	619.00
IUUC-Xma-133028	Xiphophorus maculatus	38.79	1.00e-180	625.00
IUUC-Yli-134484	Yarrowia lipolytica	37.04	3.00e-153	535.00
IUUC-Zma-135938	Zea mays	59.48	0.00e+00	1052.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence