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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007052
UUCD1 version UUC-ArT-01030
Ensembl Protein ID AT3G21830.1
UniProt Accession Q9LSY1; ASK8_ARATH
Genbank Protein ID BAB02845.1; AEE76556.1; AAY78749.1
Protein Name SKP1-like protein 8
Genbank Nucleotide ID AB025634; CP002686; DQ056601
Gene Name ASK8; At3g21830; MSD21.20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G21830 AT3G21830.1 AT3G21830.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/SCF/SKP1 2.70e-27 95.6 103 150
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
    ksLL l+ +tVadmikg+tp ++R++FnienD+tpeEea++R+En+WA
   Q: 103 KSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWA 150
    89*********************************************9 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Protein Sequence
(Fasta)
MSTKKIMLKS SEGKTFEIEE ETARQCQTIA HMIEAECTDN VILVLKMTSE ILEMVIEYCN 60
KHHVDAANPC SDDDLEKWDK EFMEKDKSTI FALTNAANFL NNKSLLHLAG QTVADMIKGN 120
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Protein Fasta Sequence



>IUUC-Ath-007052|E3,SKP1|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
ATGTCGACGA AAAAGATCAT GTTGAAGAGC TCCGAGGGTA AAACGTTTGA GATTGAAGAA 60
GAGACCGCAC GCCAATGCCA GACCATAGCT CATATGATTG AAGCCGAATG TACAGATAAC 120
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Nucleotide Fasta Sequence



>IUUC-Ath-007052|E3,SKP1|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0016567--P:protein ubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT3G21830
Created Date 25-Jun-2017

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