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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-006856
UUCD1 version UUC-ArT-01031
Ensembl Protein ID AT3G21850.1
UniProt Accession Q9LSX9; A0MEX6; ASK9_ARATH
Genbank Protein ID BAB02847.1; AEE76558.1; ABE65955.1; ABK28567.1
Protein Name SKP1-like protein 9
Genbank Nucleotide ID AB025634; CP002686; DQ446683; DQ653099
Gene Name ASK9; At3g21850; MSD21.22
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G21850 AT3G21850.1 AT3G21850.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAMentha
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/SCF/SKP1 SKP1 12169662; 12795696; 16983093
Classification
Family E-value Score Start End
E3 adaptor/Cullin RING/SCF/SKP1 2.40e-28 99.0 104 151
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
    ksL+dl+c+tVa++ikg+tpe+iR++FnienD+tpeEea++R+En+WA
   Q: 104 KSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWA 151
    89*********************************************9 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Protein Sequence
(Fasta)
MSTKKIILKS SDGHSFEVEE EAARQCQIII AHMSENDCTD NGIPLPNVTG KILAMVIEYC 60
NKHHVDAANP CSDDDLKKWD KEFMEKDTST IFDLIKAANY LNIKSLFDLA CQTVAEIIKG 120
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Protein Fasta Sequence



>IUUC-Ath-006856|E3,SKP1|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
TATTACTCAA TCATTTACTC AATTCTTCAA TCTTCCAGAG AAAAAATCTC CCCCACTGAA 60
AAAATAATGT CGACGAAGAA GATCATATTG AAGAGCTCCG ATGGTCACTC ATTCGAGGTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006856|E3,SKP1|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0005634--C:nucleus
GO:0016567--P:protein ubiquitination
GO:0007346--P:regulation of mitotic cell cycle
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT3G21850
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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