iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111594

Ensembl Protein ID

Solyc11g066040.1.1

UniProt Accession

K4D9L3; K4D9L3_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g066040.1	Solyc11g066040.1.1	Solyc11g066040.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-35	121.0	257	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+Iekwl+ g++tcP+t+q lt+++l+Pn++lr+li +wce+n++
   Q: 257  IPDDFRCPISLELMTDPVIVSTGQTYERSCIEKWLEAGHSTCPKTQQALTSKSLTPNYVLRSLIAQWCEANGI 329
           89********************************************************************986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGEEDKGEVA KKLIEIVNDI SSISDYRISV KKQFCNLARR LKLLTPMFEE IRDSKEKLPI 60
ESMKSLISLK EALESAKELL KFGSEGSKIY LVLEMEHIMN KFQELTSKLE QALNGIYYEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGAAG AAGATAAAGG AGAAGTAGCT AAAAAGTTGA TTGAAATAGT TAATGATATA 60
TCGAGCATAT CGGATTATAG AATTTCTGTG AAGAAACAGT TCTGTAATTT AGCTCGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101255460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001147	Aegilops tauschii	65.48	0.00e+00	682.00
IUUC-Aly-005681	Arabidopsis lyrata	69.35	0.00e+00	898.00
IUUC-Ath-007618	Arabidopsis thaliana	70.43	0.00e+00	895.00
IUUC-Bdi-014772	Brachypodium distachyon	63.32	0.00e+00	766.00
IUUC-Bol-015254	Brassica oleracea	71.00	0.00e+00	878.00
IUUC-Bra-017857	Brassica rapa	71.00	0.00e+00	871.00
IUUC-Gma-043064	Glycine max	73.77	0.00e+00	974.00
IUUC-Hvu-047052	Hordeum vulgare	64.01	0.00e+00	673.00
IUUC-Lpe-051284	Leersia perrieri	61.98	0.00e+00	751.00
IUUC-Mtr-058332	Medicago truncatula	72.60	0.00e+00	953.00
IUUC-Mac-064441	Musa acuminata	59.61	0.00e+00	651.00
IUUC-Oba-075184	Oryza barthii	62.38	0.00e+00	756.00
IUUC-Obr-076590	Oryza brachyantha	61.40	0.00e+00	738.00
IUUC-Ogl-077386	Oryza glaberrima	62.38	0.00e+00	756.00
IUUC-Ogu-078326	Oryza glumaepatula	62.38	0.00e+00	757.00
IUUC-Oin-079687	Oryza indica	62.38	0.00e+00	754.00
IUUC-Olo-081001	Oryza longistaminata	62.38	0.00e+00	756.00
IUUC-Ome-081417	Oryza meridionalis	61.92	0.00e+00	764.00
IUUC-Oni-082379	Oryza nivara	62.38	0.00e+00	754.00
IUUC-Opu-083774	Oryza punctata	61.02	0.00e+00	754.00
IUUC-Oru-084885	Oryza rufipogon	62.38	0.00e+00	755.00
IUUC-Osa-085946	Oryza sativa	62.05	0.00e+00	749.00
IUUC-Ppa-095383	Physcomitrella patens	50.81	7.00e-180	623.00
IUUC-Pop-098809	Populus trichocarpa	76.92	0.00e+00	1011.00
IUUC-Ppe-102057	Prunus persica	75.83	0.00e+00	859.00
IUUC-Smo-109163	Selaginella moellendorffii	54.11	1.00e-173	602.00
IUUC-Sit-110392	Setaria italica	65.93	0.00e+00	697.00
IUUC-Stu-112876	Solanum tuberosum	97.44	0.00e+00	1270.00
IUUC-Sbi-113843	Sorghum bicolor	62.78	0.00e+00	726.00
IUUC-Tca-121745	Theobroma cacao	73.94	0.00e+00	958.00
IUUC-Tae-124662	Triticum aestivum	62.60	0.00e+00	741.00
IUUC-Tur-126457	Triticum urartu	65.71	0.00e+00	690.00
IUUC-Tme-127103	Tuber melanosporum	32.52	2.00e-17	83.20
IUUC-Vvi-131752	Vitis vinifera	77.37	0.00e+00	957.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence