iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007698

UUCD1 version

UUC-ArT-00696

Ensembl Protein ID

AT3G49060.1

UniProt Accession

Q94A51; Q67YL5; Q67YP5; Q9SMU3; PUB32_ARATH

Genbank Protein ID

CAB62004.1; AEE78494.1; AAK91387.1; AAO42772.1; BAD44009.1; BAD44090.1; BAD44216.1; BAD44186.1

Protein Name

U-box domain-containing protein 32; Plant U-box protein 32; RING-type E3 ubiquitin transferase PUB32

Genbank Nucleotide ID

AL132967; CP002686; AY050369; BT004526; AK176246; AK176327; AK176453; AK176423

Gene Name

PUB32; At3g49060; T2J13.100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G49060	AT3G49060.1	AT3G49060.1
AT3G49060	AT3G49060.3	AT3G49060.3
AT3G49060	AT3G49060.2	AT3G49060.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.00e-22	78.7	735	803

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           +p+++lCpI  e+M+dP ++++G ty++++I++wla+g+ t+P+t+ ++++ +l+Pn++l+  iq+w +
   Q: 735  PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDWQN 803
           699****************************************************************76 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MGEIGGEELV LDVDETIFVA VAEDVERSKT TVLWAARNFS GKKICLLYVH RTARAASWTH 60
KKLVGGSFKK HDVKVIERVE KPKVDELMNS YLQLLSETEI QTDKLCIAGQ NIEECIVELI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGACCTCTT TGTTTTGGGT AGGAGAGACT ATTCATCAAA AAATGAACCA ACCATAACAT 60
TTTTTTTTCC TATATCTTCT AATTAGGTAA ATCGGTTGAC TCATAAACCG AGTCAGCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0067--ATP-binding
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR017441--Protein_kinase_ATP_BS
IPR014729--Rossmann-like_a/b/a_fold
IPR001245--Ser-Thr/Tyr_kinase_cat_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00107--PROTEIN_KINASE_ATP
PS50011--PROTEIN_KINASE_DOM
PS51698--U_BOX

Pfam

PF07714--Pkinase_Tyr
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005886--C:plasma membrane
GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT3G49060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006439	Arabidopsis lyrata	95.53	0.00e+00	1549.00
IUUC-Bol-015566	Brassica oleracea	84.00	0.00e+00	1370.00
IUUC-Bra-016657	Brassica rapa	86.10	0.00e+00	1383.00
IUUC-Mtr-058657	Medicago truncatula	52.54	8.00e-136	476.00
IUUC-Ptr-090505	Pan troglodytes	26.95	2.00e-18	86.70
IUUC-Pop-099003	Populus trichocarpa	46.80	0.00e+00	686.00
IUUC-Ppe-101654	Prunus persica	54.60	3.00e-151	528.00
IUUC-Sly-111920	Solanum lycopersicum	48.75	2.00e-136	479.00
IUUC-Stu-112331	Solanum tuberosum	42.52	7.00e-177	613.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence