iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016169

Ensembl Protein ID

Bo1g078990.1

UniProt Accession

A0A0D3A9G9; A0A0D3A9G9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g078990	Bo1g078990.1	Bo1g078990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-08	34.6	181	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.......sd..tllvsGsdDgtikvW 28
           H+++v+ +++       s+   llv+Gs Dg++k+W
   Q: 181  HSSWVSTMSWgifgcdsSNpqMLLVTGSCDGSVKIW 216
           ***************984444669************ PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MNFGESNNLS STSLSNKDQV VQPDTEDDER IPILRTRKRR RTSVDNINLH EMDITDQASC 60
SKQDNQTVNN VLAIELYEQP SNAHNCHSLP KAPKKCSREI SPEKYVSREA LLSSLSVAWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTTG GAGAGTCCAA CAATCTTTCT TCTACGTCAT TATCTAACAA GGTAACCTGT 60
ATCTTCTTAA CTAATCAGTC AAAGTTTCTT TTTTACTTGC TCCTATAAGG GATGATCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	41.44	2.00e-99	357.00
IUUC-Aly-005715	Arabidopsis lyrata	81.25	0.00e+00	1078.00
IUUC-Ath-007637	Arabidopsis thaliana	80.72	0.00e+00	1123.00
IUUC-Bdi-014902	Brachypodium distachyon	40.03	4.00e-119	422.00
IUUC-Bra-017736	Brassica rapa	95.69	0.00e+00	1337.00
IUUC-Gma-044065	Glycine max	46.34	1.00e-150	526.00
IUUC-Mtr-057870	Medicago truncatula	45.53	4.00e-154	538.00
IUUC-Mac-065235	Musa acuminata	46.23	2.00e-95	343.00
IUUC-Ogl-077286	Oryza glaberrima	36.62	2.00e-110	392.00
IUUC-Oin-079863	Oryza indica	36.47	3.00e-110	392.00
IUUC-Oru-084242	Oryza rufipogon	34.68	5.00e-96	345.00
IUUC-Osa-085660	Oryza sativa	36.62	3.00e-110	392.00
IUUC-Ppa-095823	Physcomitrella patens	35.10	8.00e-88	318.00
IUUC-Pop-098900	Populus trichocarpa	45.64	5.00e-178	617.00
IUUC-Ppe-101763	Prunus persica	47.69	8.00e-172	597.00
IUUC-Smo-108757	Selaginella moellendorffii	32.23	3.00e-74	273.00
IUUC-Sit-110507	Setaria italica	40.82	3.00e-113	402.00
IUUC-Sly-111401	Solanum lycopersicum	45.22	2.00e-143	502.00
IUUC-Stu-112879	Solanum tuberosum	41.99	1.00e-62	233.00
IUUC-Tca-121440	Theobroma cacao	49.92	5.00e-176	611.00
IUUC-Tae-124422	Triticum aestivum	39.79	2.00e-112	399.00
IUUC-Vvi-131537	Vitis vinifera	51.14	4.00e-160	558.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence