iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065235

Ensembl Protein ID

GSMUA_Achr4P32780_001

UniProt Accession

M0SU40; M0SU40_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr4G32780_001	GSMUA_Achr4T32780_001	GSMUA_Achr4P32780_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-12	48.1	430	466

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.........sdtllvsGsdDgtikvWD 29
           H++++t +++         s  +l++Gs Dg++k+W+
   Q: 430  HNAWITTISWemlaarlrmSQLILATGSSDGSVKIWS 466
           9***********999997654679************8 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MASHWQAVPL VASPSYPNSI AWSNENLVAV ASGHIVTIVN PALLDGPRGL ITLSPNKPFP 60
IGFVRREDLL TPCLMPTCLS RDTRPCARSI SWSQPGFASN SGCLLAVCTS EGRIKLYRAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCAC ACTGGCAGGC TGTTCCCCTG GTTGCTTCTC CGTCATATCC AAACTCCATT 60
GCATGGTCAA ATGAAAACTT GGTGGCTGTT GCTTCGGGAC ATATCGTCAC TATAGTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	40.79	5.00e-103	369.00
IUUC-Aly-005715	Arabidopsis lyrata	47.29	5.00e-90	325.00
IUUC-Ath-007637	Arabidopsis thaliana	46.61	1.00e-92	333.00
IUUC-Bdi-014902	Brachypodium distachyon	46.08	4.00e-142	498.00
IUUC-Bol-016169	Brassica oleracea	46.23	2.00e-89	323.00
IUUC-Bra-017736	Brassica rapa	45.97	8.00e-89	321.00
IUUC-Dor-030162	Dipodomys ordii	37.25	5.00e-05	41.60
IUUC-Gma-044065	Glycine max	40.37	2.00e-120	426.00
IUUC-Hvu-047339	Hordeum vulgare	47.50	3.00e-12	62.40
IUUC-Laf-054014	Loxodonta africana	37.25	2.00e-05	43.10
IUUC-Mtr-058653	Medicago truncatula	36.43	8.00e-108	384.00
IUUC-Ogl-077286	Oryza glaberrima	50.25	3.00e-163	568.00
IUUC-Oin-079863	Oryza indica	46.19	0.00e+00	771.00
IUUC-Oru-084242	Oryza rufipogon	44.35	0.00e+00	729.00
IUUC-Osa-085660	Oryza sativa	46.19	0.00e+00	775.00
IUUC-Ppa-095823	Physcomitrella patens	36.80	2.00e-58	219.00
IUUC-Pop-098900	Populus trichocarpa	43.33	4.00e-142	498.00
IUUC-Ppe-101763	Prunus persica	42.97	1.00e-127	450.00
IUUC-Smo-108757	Selaginella moellendorffii	30.75	2.00e-39	157.00
IUUC-Sit-110507	Setaria italica	45.45	1.00e-145	509.00
IUUC-Sly-111401	Solanum lycopersicum	42.52	2.00e-124	439.00
IUUC-Stu-112879	Solanum tuberosum	48.22	2.00e-58	219.00
IUUC-Ssc-115607	Sus scrofa	31.03	7.00e-04	38.10
IUUC-Tca-121440	Theobroma cacao	50.13	1.00e-99	357.00
IUUC-Tae-124422	Triticum aestivum	45.82	2.00e-143	503.00
IUUC-Vvi-131537	Vitis vinifera	51.32	2.00e-97	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence