iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131537

UUCD1 version

UUC-ViV-00394

Ensembl Protein ID

VIT_16s0098g01030.t01

UniProt Accession

E0CVB7; E0CVB7_VITVI

Genbank Protein ID

CBI23078.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595247

Gene Name

VIT_16s0098g01030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0098g01030	VIT_16s0098g01030.t01	VIT_16s0098g01030.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-11	43.1	231	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.........sdtllvsGsdDgtikvW 28
           H+ +vt++++         +  ll++Gs Dg++k+W
   Q: 231  HNTWVTAISWalltsdassPQVLLATGSTDGSVKIW 266
           999***********999643388************* PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASRFQAASL VASPSYPNAV AWSDENLIAV ATGHLVTILN PALPFGPRGL ITIPANKPFP 60
IGVIERQDLY SGCLLSTCLS RDIRPCVRSI SWSHIGLAPN AGCLLAICTI EGRVKLYRAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCCC GTTTCCAAGC CGCTTCGCTC GTGGCTTCGC CGTCGTACCC CAATGCCGTC 60
GCCTGGTCCG ACGAGAACCT CATCGCCGTC GCCACCGGCC ACCTCGTCAC CATACTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	46.97	4.00e-119	421.00
IUUC-Aly-005715	Arabidopsis lyrata	50.57	7.00e-153	533.00
IUUC-Ath-007637	Arabidopsis thaliana	50.73	1.00e-161	562.00
IUUC-Bdi-014902	Brachypodium distachyon	42.23	2.00e-124	439.00
IUUC-Bol-016169	Brassica oleracea	51.14	3.00e-155	541.00
IUUC-Bra-017736	Brassica rapa	51.30	7.00e-161	560.00
IUUC-Gma-044065	Glycine max	51.44	0.00e+00	750.00
IUUC-Hvu-047339	Hordeum vulgare	41.25	5.00e-06	41.20
IUUC-Mtr-057870	Medicago truncatula	50.00	0.00e+00	776.00
IUUC-Mac-065235	Musa acuminata	51.32	3.00e-97	348.00
IUUC-Ogl-077286	Oryza glaberrima	38.84	5.00e-119	421.00
IUUC-Oin-079863	Oryza indica	39.17	7.00e-120	424.00
IUUC-Oru-084242	Oryza rufipogon	36.96	7.00e-104	370.00
IUUC-Osa-085660	Oryza sativa	39.00	1.00e-119	423.00
IUUC-Ppa-095823	Physcomitrella patens	35.40	5.00e-84	304.00
IUUC-Pop-098900	Populus trichocarpa	57.69	0.00e+00	719.00
IUUC-Ppe-101763	Prunus persica	53.73	0.00e+00	776.00
IUUC-Smo-108757	Selaginella moellendorffii	33.54	4.00e-77	281.00
IUUC-Sit-110507	Setaria italica	41.16	6.00e-124	437.00
IUUC-Sly-111401	Solanum lycopersicum	54.38	7.00e-178	616.00
IUUC-Stu-112879	Solanum tuberosum	57.48	1.00e-61	229.00
IUUC-Tca-121440	Theobroma cacao	60.19	0.00e+00	721.00
IUUC-Tae-124422	Triticum aestivum	41.76	4.00e-123	434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence