iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018078

Ensembl Protein ID

Bra012903.1-P

UniProt Accession

M4D8U3; M4D8U3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012903	Bra012903.1	Bra012903.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-31	107.9	206	243
UBD/Beta-Prp	2.30e-61	208.6	99	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H d ++cl +  +++ll sGs+D t kvW++++ ++l 
   Q: 206  HVDAISCLTLseDNKLLYSGSWDQTFKVWRISDLRCLE 243
           99********9544*****************9999986 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls............................. 82
           ++   +++ll tgs+++ i+vw+++t   ++s++++++ v+a+ +  d   + tg++D+ i+vw +s                             
   Q: 99   LAT--SGDLLYTGSDSKNIRVWKNQT--EFSSFKSNSGLVKAIVLAGD--KIFTGHQDGKIRVWKVSskdsnifrrigtmpvfrdylrnsitpssy 188
           444..899*****************9..668*****************..69************88888999************************ PP
   S: 83   ........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.... 166
                   t++  + ++ h d + +l++s++++ l sGs+d+t +vw ++   cle   + hd++vn vv ++++ l++sGs+D+tv++W+     
   Q: 189  fsfmrknpTSTSAQGFR-HVDAISCLTLSEDNKLLYSGSWDQTFKVWRISDLRCLE-SVKAHDDAVNAVV-SGFDGLVFSGSADGTVKVWRRedqa 281
           ****9888888888888.**************************************.9999999999876.57799****************9877 PP
   S: 167  ..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
                +  +tl + ++ +v+ +++d++ + +  gs dgtv++w+   + +    l+gh+  v+++ +   + +l sgs+D  ir+W
   Q: 282  keTKHFFSETLLK-QDCAVTAIAVDQSATLVYCGSSDGTVNFWERDnNMKNGGVLKGHKLAVLCLVAA--GSLLFSGSADLGIRVW 364
           7555566667787.*****************************999544457899*************..**************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHHKASSRDT NSQNFPKLKS VETDPDPDIY DITYVDVSPS VGSTSPLSKS PWIAHVDPTD 60
LEPPHSGIKS TANTREPKNY SPNILMGSLF REEGHIYSLA TSGDLLYTGS DSKNIRVWKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATCACA AGGCTTCAAG CAGAGACACC AACAGCCAGA ACTTTCCAAA ACTCAAGAGT 60
GTAGAAACTG ATCCAGATCC TGACATTTAT GACATAACAT ACGTCGATGT CTCTCCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007546	Arabidopsis thaliana	77.59	0.00e+00	710.00
IUUC-Pop-099710	Populus trichocarpa	65.98	9.00e-144	503.00
IUUC-Ppe-101450	Prunus persica	60.83	5.00e-152	530.00
IUUC-Tca-121487	Theobroma cacao	66.67	3.00e-161	561.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence