iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007228

UUCD1 version

UUC-ArT-00372

Ensembl Protein ID

AT3G53410.1

UniProt Accession

Q9LFH6; LUL2_ARATH

Genbank Protein ID

CAB67648.1; AEE79082.1; AAO24565.1; BAF00081.1; AAM61084.1

Protein Name

Probable E3 ubiquitin-protein ligase LUL2; Probable RING-type E3 ubiquitin transferase LUL2; Protein LOG2-LIKE UBIQUITIN LIGASE 2; RING finger protein 269

Genbank Nucleotide ID

AL132966; CP002686; BT003133; AK228124; AY084516

Gene Name

LUL2; RF269; At3g53410; F4P12_110

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G53410	AT3G53410.1	AT3G53410.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
PINA	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23824688

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	0.00017	23.0	243	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgH.vfhadClqkwpglknssskefrCPlCr 46
           C iCl++++d + vlpC H +++  C + +        ++ +CP+Cr
   Q: 243  CVICLSEPRD-TTVLPCRHmCMCSGCAKLL------RFQTNLCPICR 282
           ********99.888*****889****9777......99999*****8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro).

Protein Sequence
(Fasta)

MGNVISGGSR PENHRDRTSP PYPNPNAQYQ GNYPSPYQDC ARYPYGEMAS PVQYVEHQEA 60
VTIRNDINLK KETLRLEPDE QNPGKFLLSF TFDASVPGSI TVMFFAKEGK DCNLIATKED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTTTCAT CTTTTTGTAA TCGATTTGCA ATTTCAATTT CGCAAAGTTG GATCATGGGC 60
AATGTCATAA GCGGTGGAAG CCGCCCGGAA AATCATCGGG ACCGTACTTC GCCGCCGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0479--Metal-binding
KW-0519--Myristate
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G53410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005731	Arabidopsis lyrata	87.09	1.00e-157	547.00
IUUC-Bgr-012222	Blumeria graminis	26.90	9.00e-08	52.00
IUUC-Bol-016268	Brassica oleracea	78.40	2.00e-104	371.00
IUUC-Bra-017002	Brassica rapa	76.54	1.00e-100	358.00
IUUC-Cre-022780	Chlamydomonas reinhardtii	40.89	2.00e-46	178.00
IUUC-Mla-059017	Melampsora laricipopulina	33.85	2.00e-06	46.20
IUUC-Opu-084142	Oryza punctata	57.19	8.00e-93	333.00
IUUC-Olu-087575	Ostreococcus lucimarinus	58.43	7.00e-26	107.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence