iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017191

Ensembl Protein ID

Bra014787.1-P

UniProt Accession

M4DE68; M4DE68_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra014787	Bra014787.1	Bra014787.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.60e-30	103.5	235	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+s elM dPv+++sG+t+dr+sI+kwl++g   cP trq lt+++l+Pn+t++++i +w+eens+
   Q: 235  IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLDVCPRTRQVLTHQELIPNYTVKAMIASWLEENSI 307
           8*********************************************************************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDPVPVRCLL NSISRYLHLV ACQTIRYKPI QTCIGNVVHL LKLLKPFLDD VVDCKVPPDD 60
CLNSACEDLD SVVNQAREFL EDWSPKMSKL FGVFHSELLL EKVQTCSLEI SRILVQLSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCTG TGCCGGTTCG ATGCCTCCTT AACAGCATTT CTCGTTACCT TCATCTGGTT 60
GCATGCCAGA CCATAAGATA CAAGCCCATC CAAACATGTA TTGGAAATGT GGTTCACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005439	Arabidopsis lyrata	83.01	0.00e+00	1085.00
IUUC-Ath-007270	Arabidopsis thaliana	84.33	0.00e+00	1110.00
IUUC-Bol-015931	Brassica oleracea	97.15	0.00e+00	1330.00
IUUC-Gma-042814	Glycine max	46.12	1.00e-84	307.00
IUUC-Mtr-058671	Medicago truncatula	70.69	6.00e-113	401.00
IUUC-Pop-099351	Populus trichocarpa	55.63	0.00e+00	733.00
IUUC-Ppe-101535	Prunus persica	54.74	0.00e+00	674.00
IUUC-Sly-111511	Solanum lycopersicum	48.64	3.00e-156	545.00
IUUC-Stu-112793	Solanum tuberosum	49.12	8.00e-170	590.00
IUUC-Tca-121486	Theobroma cacao	55.49	0.00e+00	728.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence