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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007539
UUCD1 version UUC-ArT-01537
Ensembl Protein ID AT3G60020.1
UniProt Accession Q9M1X4; ASK5_ARATH
Genbank Protein ID CAB75821.1; AEE80003.1; AAY78779.1
Protein Name SKP1-like protein 5
Genbank Nucleotide ID AL138647; CP002686; DQ056631
Gene Name ASK5; At3g60020; F24G16.290; T2O9.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G60020 AT3G60020.1 AT3G60020.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAMentha
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/SCF/SKP1 SKP1 12169662; 12795696; 16983093
Classification
Family E-value Score Start End
E3 adaptor/Cullin RING/SCF/SKP1 2.20e-27 95.8 99 151
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmik.....gktpeeiRktFnienDftpeEeakvReEnqWA 48
    +sLLdltcktV+d+++ gktp+eiR++FnienD+t+eE+ak+ReEnqWA
   Q: 99 QSLLDLTCKTVSDLLQadllsGKTPDEIRAHFNIENDLTAEEVAKIREENQWA 151
    79**************************************************9 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
Protein Sequence
(Fasta)
MSTKIMLKSS DGKSFEIDED VARKSIAINH MVEDGCATDV IPLRNVTSKI LKIVIDYCEK 60
HVKSKEEEDL KEWDADFMKT IETTILFDVM MAANYLNIQS LLDLTCKTVS DLLQADLLSG 120
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Protein Fasta Sequence



>IUUC-Ath-007539|E3,SKP1|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
ATCGCTCTCT AAATTCTTCT TCAATCTTGT TTCATCAACC TTGCTTTCCA GAGAAAAATC 60
GCTCCATAAC AATGTCGACG AAGATCATGT TGAAGAGCTC CGATGGTAAA TCGTTCGAGA 120
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Nucleotide Fasta Sequence



>IUUC-Ath-007539|E3,SKP1|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0005634--C:nucleus
GO:0016567--P:protein ubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT3G60020
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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