iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005761

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_912242

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_604299.1	scaffold_604299.1	scaffold_604299.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-19	69.8	84	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d vt+l+f sd + l++++ Dg+i+v+ l++
   Q: 84   GHGDAVTGLCFsSDgRSLATACADGVIRVFKLDD 117
           8***********99999*************9977 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MESVIVVAIA SVIFGALIAV LFFGNYFRKR TSEVQSMAKA EPQDPIRNPK SNHPAPKKNH 60
PKSQASDKNQ NKRHHPLDLN TLKGHGDAVT GLCFSSDGRS LATACADGVI RVFKLDDASS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGTTGTCA AATTCGAAAA ATGGAATCGG TCATTGTAGT GGCCATTGCA TCTGTTATCT 60
TCGGTGCGTT GATCGCCGTG CTCTTCTTCG GTAACTACTT CCGGAAGCGG ACATCGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane

KEGG

aly:ARALYDRAFT_912242

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	66.01	4.00e-73	266.00
IUUC-Aml-002212	Ailuropoda melanoleuca	30.29	5.00e-39	154.00
IUUC-Atr-002903	Amborella trichopoda	67.75	2.00e-177	614.00
IUUC-Apl-003635	Anas platyrhynchos	34.63	7.00e-37	147.00
IUUC-Aca-004472	Anolis carolinensis	34.06	2.00e-37	149.00
IUUC-Ath-007476	Arabidopsis thaliana	96.51	0.00e+00	865.00
IUUC-Ame-011221	Astyanax mexicanus	31.86	2.00e-43	169.00
IUUC-Bta-013186	Bos taurus	30.79	6.00e-38	150.00
IUUC-Bdi-014298	Brachypodium distachyon	68.44	1.00e-144	505.00
IUUC-Bol-015192	Brassica oleracea	86.74	0.00e+00	763.00
IUUC-Bra-017078	Brassica rapa	87.21	0.00e+00	767.00
IUUC-Cel-018602	Caenorhabditis elegans	26.36	9.00e-27	114.00
IUUC-Cja-018909	Callithrix jacchus	31.90	1.00e-36	147.00
IUUC-Cfa-020970	Canis familiaris	31.40	4.00e-40	158.00
IUUC-Cpo-022215	Cavia porcellus	31.32	8.00e-38	150.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	41.24	3.00e-35	140.00
IUUC-Csa-023530	Chlorocebus sabaeus	30.54	8.00e-39	154.00
IUUC-Cho-024598	Choloepus hoffmanni	31.45	1.00e-26	113.00
IUUC-Cin-025486	Ciona intestinalis	27.07	7.00e-31	127.00
IUUC-Csv-025930	Ciona savignyi	24.79	2.00e-22	99.00
IUUC-Dre-027507	Danio rerio	33.12	7.00e-43	167.00
IUUC-Dno-029726	Dasypus novemcinctus	30.26	5.00e-38	151.00
IUUC-Dor-030501	Dipodomys ordii	34.05	1.00e-27	116.00
IUUC-Ete-032794	Echinops telfairi	33.79	1.00e-29	122.00
IUUC-Eca-033982	Equus caballus	31.67	1.00e-36	146.00
IUUC-Eeu-035090	Erinaceus europaeus	34.70	3.00e-29	122.00
IUUC-Fca-035944	Felis catus	30.00	2.00e-40	159.00
IUUC-Fal-036992	Ficedula albicollis	31.63	1.00e-34	140.00
IUUC-Gmo-038710	Gadus morhua	30.53	1.00e-41	163.00
IUUC-Gga-040885	Gallus gallus	36.36	4.00e-28	117.00
IUUC-Gac-041922	Gasterosteus aculeatus	32.84	7.00e-43	167.00
IUUC-Gma-044233	Glycine max	75.31	9.00e-180	622.00
IUUC-Ggo-045172	Gorilla gorilla	31.92	8.00e-38	150.00
IUUC-Hsa-045711	Homo sapiens	31.64	4.00e-38	151.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	30.89	9.00e-38	150.00
IUUC-Lch-049739	Latimeria chalumnae	30.09	3.00e-40	158.00
IUUC-Lpe-050795	Leersia perrieri	55.86	1.00e-121	428.00
IUUC-Loc-052113	Lepisosteus oculatus	32.31	4.00e-38	151.00
IUUC-Laf-053751	Loxodonta africana	30.97	3.00e-40	158.00
IUUC-Mcc-055022	Macaca mulatta	31.19	9.00e-39	153.00
IUUC-Meu-056003	Macropus eugenii	29.10	2.00e-35	142.00
IUUC-Mtr-058500	Medicago truncatula	74.63	7.00e-176	609.00
IUUC-Mga-059278	Meleagris gallopavo	33.33	1.00e-28	119.00
IUUC-Mmr-061148	Microcebus murinus	31.85	5.00e-40	158.00
IUUC-Mdo-063002	Monodelphis domestica	30.26	2.00e-32	132.00
IUUC-Mmu-063607	Mus musculus	29.23	1.00e-36	146.00
IUUC-Mac-065359	Musa acuminata	64.30	2.00e-165	574.00
IUUC-Mpu-066323	Mustela putorius furo	31.03	1.00e-37	149.00
IUUC-Mlu-067946	Myotis lucifugus	31.11	2.00e-39	156.00
IUUC-Nle-069019	Nomascus leucogenys	31.92	3.00e-38	152.00
IUUC-Opr-071047	Ochotona princeps	29.23	8.00e-38	150.00
IUUC-Ont-071694	Oreochromis niloticus	33.85	9.00e-42	163.00
IUUC-Ocu-074493	Oryctolagus cuniculus	31.03	8.00e-37	147.00
IUUC-Oba-075468	Oryza barthii	63.31	2.00e-142	498.00
IUUC-Obr-076681	Oryza brachyantha	68.14	2.00e-135	475.00
IUUC-Ogl-077870	Oryza glaberrima	63.31	2.00e-142	498.00
IUUC-Ogu-078536	Oryza glumaepatula	63.31	2.00e-142	498.00
IUUC-Oin-080175	Oryza indica	63.31	2.00e-142	498.00
IUUC-Olo-080796	Oryza longistaminata	66.31	3.00e-137	480.00
IUUC-Oni-082076	Oryza nivara	63.31	2.00e-142	498.00
IUUC-Opu-083267	Oryza punctata	66.75	5.00e-142	496.00
IUUC-Oru-084553	Oryza rufipogon	63.31	1.00e-142	498.00
IUUC-Osa-085389	Oryza sativa	63.31	2.00e-142	498.00
IUUC-Ola-086414	Oryzias latipes	35.02	4.00e-45	174.00
IUUC-Oga-088656	Otolemur garnettii	31.55	6.00e-39	154.00
IUUC-Oar-089719	Ovis aries	30.47	2.00e-37	149.00
IUUC-Ptr-091087	Pan troglodytes	31.64	4.00e-38	151.00
IUUC-Pan-091709	Papio anubis	31.19	1.00e-38	153.00
IUUC-Psi-093265	Pelodiscus sinensis	29.69	2.00e-36	146.00
IUUC-Ppa-095365	Physcomitrella patens	57.18	4.00e-128	450.00
IUUC-Pfo-097494	Poecilia formosa	32.66	3.00e-43	168.00
IUUC-Pab-098362	Pongo abelii	31.92	9.00e-39	153.00
IUUC-Pop-099474	Populus trichocarpa	68.86	2.00e-170	590.00
IUUC-Pca-101019	Procavia capensis	35.94	4.00e-31	128.00
IUUC-Ppe-102101	Prunus persica	73.67	0.00e+00	667.00
IUUC-Pva-102849	Pteropus vampyrus	32.18	5.00e-39	154.00
IUUC-Rno-105511	Rattus norvegicus	29.94	2.00e-36	145.00
IUUC-Sha-107265	Sarcophilus harrisii	30.00	2.00e-34	139.00
IUUC-Smo-108866	Selaginella moellendorffii	57.10	3.00e-119	421.00
IUUC-Sit-110806	Setaria italica	60.00	3.00e-146	510.00
IUUC-Sly-110994	Solanum lycopersicum	67.66	6.00e-173	599.00
IUUC-Stu-112493	Solanum tuberosum	72.01	3.00e-119	420.00
IUUC-Sar-113628	Sorex araneus	32.23	7.00e-37	147.00
IUUC-Sbi-114397	Sorghum bicolor	59.57	1.00e-144	505.00
IUUC-Ssc-116418	Sus scrofa	29.75	5.00e-39	154.00
IUUC-Tgu-117054	Taeniopygia guttata	31.27	2.00e-37	149.00
IUUC-Tru-118504	Takifugu rubripes	31.15	1.00e-44	173.00
IUUC-Tni-120254	Tetraodon nigroviridis	31.69	3.00e-45	175.00
IUUC-Tca-121085	Theobroma cacao	73.98	1.00e-180	625.00
IUUC-Tae-124351	Triticum aestivum	67.04	9.00e-142	496.00
IUUC-Tur-126756	Triticum urartu	59.84	7.00e-124	436.00
IUUC-Tbe-127903	Tupaia belangeri	31.38	1.00e-37	149.00
IUUC-Ttr-129118	Tursiops truncatus	31.10	6.00e-41	160.00
IUUC-Vvi-131125	Vitis vinifera	70.05	0.00e+00	630.00
IUUC-Xtr-132287	Xenopus tropicalis	30.99	1.00e-38	153.00
IUUC-Xma-134246	Xiphophorus maculatus	32.95	8.00e-44	170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence