iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095436

Ensembl Protein ID

PP1S47_43V6.1

UniProt Accession

A9S4A5; A9S4A5_PHYPA

Genbank Protein ID

EDQ73869.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544936

Gene Name

PHYPADRAFT_162749

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S47_43V6	PP1S47_43V6.1	PP1S47_43V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-17	64.0	1119	1160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtcla.f........sd.tllvsGsdDgtikvWDlrtgv 34
           t +v +l+ +        ++  l++sG+ Dg+i vWD++  v
   Q: 1119 TVPVLALQhLvvpmeggrQNmYLIISGATDGSIAVWDITNLV 1160
           55555554246666666644478**************98766 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGMESVGGIV IEVEKRDSGW RAEVVAMQSE EEDEEASLGD CGVFKGPYLG DVSALCFLST 60
PSLPYLVAGT GPQILLYDLA TGYLLLSQHV FDGVRVHGIH VRRDHPADHP ESNNLATIAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATGG AGTCAGTGGG AGGCATTGTC ATTGAGGTAG AGAAACGTGA TTCTGGCTGG 60
CGCGCTGAAG TTGTTGCGAT GCAGAGCGAA GAAGAAGACG AAGAAGCAAG TCTCGGGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_162749

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	31.97	3.00e-118	419.00
IUUC-Aml-001786	Ailuropoda melanoleuca	24.07	9.00e-38	152.00
IUUC-Atr-003053	Amborella trichopoda	36.53	0.00e+00	804.00
IUUC-Aca-004886	Anolis carolinensis	28.49	2.00e-32	134.00
IUUC-Aly-005509	Arabidopsis lyrata	37.07	0.00e+00	800.00
IUUC-Ath-007109	Arabidopsis thaliana	36.64	0.00e+00	777.00
IUUC-Ago-007817	Ashbya gossypii	27.57	2.00e-22	100.00
IUUC-Ate-010299	Aspergillus terreus	21.05	9.00e-09	55.50
IUUC-Ame-011051	Astyanax mexicanus	24.95	1.00e-33	137.00
IUUC-Bgr-012077	Blumeria graminis	21.64	4.00e-21	96.70
IUUC-Bta-012793	Bos taurus	23.38	5.00e-38	152.00
IUUC-Bci-013679	Botrytis cinerea	23.65	1.00e-13	72.00
IUUC-Bdi-014401	Brachypodium distachyon	36.07	0.00e+00	713.00
IUUC-Bol-015628	Brassica oleracea	37.04	0.00e+00	680.00
IUUC-Bra-017446	Brassica rapa	36.91	0.00e+00	757.00
IUUC-Cja-018910	Callithrix jacchus	23.19	7.00e-37	149.00
IUUC-Cfa-021260	Canis familiaris	23.42	9.00e-38	152.00
IUUC-Cpo-022205	Cavia porcellus	24.61	1.00e-39	158.00
IUUC-Csa-023510	Chlorocebus sabaeus	23.17	7.00e-36	145.00
IUUC-Dre-028004	Danio rerio	22.52	2.00e-24	107.00
IUUC-Dno-029804	Dasypus novemcinctus	23.23	6.00e-36	145.00
IUUC-Dor-030512	Dipodomys ordii	24.60	1.00e-28	121.00
IUUC-Dme-032047	Drosophila melanogaster	24.88	1.00e-12	68.20
IUUC-Ete-033076	Echinops telfairi	28.66	2.00e-30	127.00
IUUC-Eca-033727	Equus caballus	22.48	2.00e-21	97.10
IUUC-Eeu-035210	Erinaceus europaeus	23.51	1.00e-35	144.00
IUUC-Fca-035433	Felis catus	24.06	1.00e-38	154.00
IUUC-Fal-036807	Ficedula albicollis	23.50	7.00e-09	55.10
IUUC-Gmo-039180	Gadus morhua	24.39	5.00e-24	105.00
IUUC-Gga-040482	Gallus gallus	24.20	4.00e-09	56.60
IUUC-Gac-042066	Gasterosteus aculeatus	24.41	2.00e-25	110.00
IUUC-Gma-042704	Glycine max	34.99	0.00e+00	741.00
IUUC-Ggo-044942	Gorilla gorilla	23.17	7.00e-36	145.00
IUUC-Hsa-046408	Homo sapiens	23.04	1.00e-35	145.00
IUUC-Hvu-047448	Hordeum vulgare	33.87	8.00e-174	603.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	23.93	1.00e-39	157.00
IUUC-Kpa-049257	Komagataella pastoris	27.95	3.00e-27	116.00
IUUC-Lch-050170	Latimeria chalumnae	22.73	5.00e-45	176.00
IUUC-Lpe-051575	Leersia perrieri	33.44	0.00e+00	670.00
IUUC-Loc-052341	Lepisosteus oculatus	26.55	5.00e-13	69.70
IUUC-Lma-053318	Leptosphaeria maculans	20.92	3.00e-17	83.60
IUUC-Laf-054299	Loxodonta africana	22.75	5.00e-34	139.00
IUUC-Mcc-055438	Macaca mulatta	22.96	9.00e-38	152.00
IUUC-Meu-056206	Macropus eugenii	27.36	2.00e-23	103.00
IUUC-Mtr-058455	Medicago truncatula	36.01	0.00e+00	704.00
IUUC-Mga-059962	Meleagris gallopavo	25.95	7.00e-09	55.10
IUUC-Mvi-060438	Microbotryum violaceum	29.36	3.00e-15	77.40
IUUC-Mmr-061353	Microcebus murinus	23.35	7.00e-37	149.00
IUUC-Mdo-062061	Monodelphis domestica	29.52	5.00e-30	125.00
IUUC-Mmu-064386	Mus musculus	24.07	2.00e-35	144.00
IUUC-Mac-065653	Musa acuminata	34.79	0.00e+00	753.00
IUUC-Mpu-066420	Mustela putorius furo	23.91	1.00e-37	151.00
IUUC-Mlu-068104	Myotis lucifugus	23.39	3.00e-36	146.00
IUUC-Nfi-068301	Neosartorya fischeri	20.72	3.00e-06	47.00
IUUC-Nle-069836	Nomascus leucogenys	23.02	1.00e-36	147.00
IUUC-Ont-071605	Oreochromis niloticus	28.06	1.00e-25	111.00
IUUC-Oan-073645	Ornithorhynchus anatinus	23.41	8.00e-40	158.00
IUUC-Ocu-074708	Oryctolagus cuniculus	23.48	2.00e-36	147.00
IUUC-Oba-075290	Oryza barthii	36.92	9.00e-178	617.00
IUUC-Obr-076647	Oryza brachyantha	34.23	0.00e+00	679.00
IUUC-Ogl-077628	Oryza glaberrima	36.99	0.00e+00	642.00
IUUC-Ogu-078209	Oryza glumaepatula	35.30	1.00e-165	577.00
IUUC-Oin-079342	Oryza indica	34.80	0.00e+00	733.00
IUUC-Olo-080334	Oryza longistaminata	33.33	3.00e-174	606.00
IUUC-Ome-081776	Oryza meridionalis	31.31	6.00e-164	571.00
IUUC-Oni-082311	Oryza nivara	34.80	0.00e+00	733.00
IUUC-Opu-083195	Oryza punctata	34.49	2.00e-178	619.00
IUUC-Oru-085006	Oryza rufipogon	36.83	1.00e-177	616.00
IUUC-Osa-085317	Oryza sativa	36.90	0.00e+00	640.00
IUUC-Ola-087145	Oryzias latipes	23.45	8.00e-27	115.00
IUUC-Olu-087785	Ostreococcus lucimarinus	24.59	8.00e-55	208.00
IUUC-Oga-088206	Otolemur garnettii	23.90	2.00e-39	157.00
IUUC-Oar-089802	Ovis aries	23.79	2.00e-39	157.00
IUUC-Ptr-091528	Pan troglodytes	22.42	2.00e-29	124.00
IUUC-Pan-092782	Papio anubis	23.17	3.00e-36	146.00
IUUC-Psi-093102	Pelodiscus sinensis	24.69	1.00e-27	117.00
IUUC-Pno-095063	Phaeosphaeria nodorum	23.66	4.00e-09	56.60
IUUC-Pfo-097423	Poecilia formosa	27.63	2.00e-18	87.80
IUUC-Pab-097763	Pongo abelii	23.04	3.00e-36	146.00
IUUC-Pop-099090	Populus trichocarpa	35.65	0.00e+00	769.00
IUUC-Pca-100173	Procavia capensis	22.59	6.00e-35	142.00
IUUC-Ppe-101580	Prunus persica	36.76	0.00e+00	764.00
IUUC-Pva-102715	Pteropus vampyrus	22.87	5.00e-30	125.00
IUUC-Pgr-103424	Puccinia graminis	23.99	1.00e-13	71.60
IUUC-Pte-104316	Pyrenophora teres	24.76	5.00e-11	63.20
IUUC-Pyt-104676	Pyrenophora triticirepentis	23.27	6.00e-12	66.20
IUUC-Rno-105122	Rattus norvegicus	24.22	1.00e-38	154.00
IUUC-Sce-106465	Saccharomyces cerevisiae	26.65	2.00e-20	94.00
IUUC-Sha-107208	Sarcophilus harrisii	22.30	6.00e-34	139.00
IUUC-Sja-107771	Schizosaccharomyces japonicus	24.42	2.00e-15	77.40
IUUC-Spo-108272	Schizosaccharomyces pombe	28.00	3.00e-16	80.10
IUUC-Smo-108961	Selaginella moellendorffii	31.52	2.00e-155	543.00
IUUC-Sit-109932	Setaria italica	34.10	0.00e+00	696.00
IUUC-Sly-111685	Solanum lycopersicum	36.47	0.00e+00	783.00
IUUC-Sar-112998	Sorex araneus	24.04	2.00e-37	151.00
IUUC-Sbi-114074	Sorghum bicolor	34.75	0.00e+00	707.00
IUUC-Ssc-115619	Sus scrofa	27.45	2.00e-29	124.00
IUUC-Tru-118104	Takifugu rubripes	25.16	2.00e-31	130.00
IUUC-Tni-119995	Tetraodon nigroviridis	27.35	4.00e-19	90.10
IUUC-Tca-121790	Theobroma cacao	36.54	0.00e+00	790.00
IUUC-Tae-125371	Triticum aestivum	35.19	0.00e+00	708.00
IUUC-Tur-126787	Triticum urartu	34.52	0.00e+00	669.00
IUUC-Tme-126957	Tuber melanosporum	30.09	5.00e-11	62.80
IUUC-Tbe-128082	Tupaia belangeri	37.74	2.00e-13	70.50
IUUC-Ttr-128387	Tursiops truncatus	23.98	5.00e-30	126.00
IUUC-Vvi-131701	Vitis vinifera	36.00	0.00e+00	754.00
IUUC-Xtr-132622	Xenopus tropicalis	21.88	7.00e-35	142.00
IUUC-Xma-134014	Xiphophorus maculatus	24.16	6.00e-32	132.00
IUUC-Yli-134589	Yarrowia lipolytica	22.96	6.00e-14	72.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence