iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007044

UUCD1 version

UUC-ArT-01576

Ensembl Protein ID

AT4G02680.1

UniProt Accession

Q9ZQX6; Q0WP84; ETOL1_ARATH

Genbank Protein ID

AAT01657.1; AAC78270.1; CAB77753.1; AEE82213.1; BAF01065.1

Protein Name

ETO1-like protein 1; Ethylene overproducer 1-like protein 1

Genbank Nucleotide ID

AY572792; AC002330; AL161495; CP002687; AK229195

Gene Name

EOL1; At4g02680; T10P11.24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G02680	AT4G02680.1	AT4G02680.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_Other	BTB_Other	18808454; 20511490

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	2.00e-09	38.6	181	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    DvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikd..vqpevfrallkFlYtgkl 65
            v++++g+e++ +++  +a+ S +F+a++++++ es   +++++++  v+ +++r++ +F+  g l
   Q: 181  NVVFKIGEEKIACQRRKIASLSAPFHAMLYGNFTESL-LDEIDMSEnhVSSSAMRVVRDFSVVGVL 245
           69**********************************9.*******668************998876 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Possible regulator of the ethylene pathway, which acts by regulating the stability of 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes. May act as a substrate-specific adapter that connects ACS enzymes, such as ACS5, to ubiquitin ligase complexes, leading to proteasomal degradation of ACS enzymes (By similarity).

Protein Sequence
(Fasta)

MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP 60
LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK LRRRSLQSAW QEATTVHEKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATGAGCAA AAACAATTGA AAAGAAGAAA AACTTTCCCT TTTACCAATG AAACAAAAGA 60
GCTCTCAGAT AATTAGAAAA GTGTCAATTT GTATAACATT TCCCACTCTC TCTCTCACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0936--Ethylene signaling pathway
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR011333--SKP1/BTB/POZ
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

SMART

SM00028--TPR

Gene Ontology

GO:0005622--C:intracellular
GO:0009873--P:ethylene-activated signaling pathway
GO:0016567--P:protein ubiquitination
GO:0010364--P:regulation of ethylene biosynthetic process

KEGG

ath:AT4G02680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000834	Aegilops tauschii	67.18	0.00e+00	1122.00
IUUC-Atr-002713	Amborella trichopoda	67.64	0.00e+00	1156.00
IUUC-Aly-005540	Arabidopsis lyrata	97.64	0.00e+00	1682.00
IUUC-Bdi-014434	Brachypodium distachyon	65.44	0.00e+00	1141.00
IUUC-Bol-015904	Brassica oleracea	92.13	0.00e+00	1592.00
IUUC-Bra-017487	Brassica rapa	86.84	0.00e+00	1462.00
IUUC-Gma-044147	Glycine max	71.17	0.00e+00	1248.00
IUUC-Hvu-047320	Hordeum vulgare	59.45	0.00e+00	743.00
IUUC-Lpe-051013	Leersia perrieri	66.85	0.00e+00	1164.00
IUUC-Mtr-058664	Medicago truncatula	68.05	0.00e+00	1166.00
IUUC-Mac-064620	Musa acuminata	70.18	0.00e+00	1225.00
IUUC-Oba-075657	Oryza barthii	67.56	0.00e+00	1166.00
IUUC-Obr-076314	Oryza brachyantha	67.00	0.00e+00	1159.00
IUUC-Ogl-077578	Oryza glaberrima	67.45	0.00e+00	1164.00
IUUC-Ogu-078008	Oryza glumaepatula	67.45	0.00e+00	1164.00
IUUC-Oin-079401	Oryza indica	67.15	0.00e+00	1157.00
IUUC-Olo-080465	Oryza longistaminata	67.34	0.00e+00	1163.00
IUUC-Ome-081345	Oryza meridionalis	67.15	0.00e+00	1159.00
IUUC-Oni-082130	Oryza nivara	67.15	0.00e+00	1157.00
IUUC-Opu-084168	Oryza punctata	67.45	0.00e+00	1163.00
IUUC-Oru-084909	Oryza rufipogon	67.15	0.00e+00	1157.00
IUUC-Osa-085596	Oryza sativa	67.15	0.00e+00	1157.00
IUUC-Pop-099652	Populus trichocarpa	72.40	0.00e+00	1264.00
IUUC-Ppe-101616	Prunus persica	74.16	0.00e+00	1315.00
IUUC-Pgr-103347	Puccinia graminis	32.08	8.00e-02	29.30
IUUC-Sit-109848	Setaria italica	67.15	0.00e+00	1169.00
IUUC-Sly-111654	Solanum lycopersicum	73.54	0.00e+00	1251.00
IUUC-Stu-112900	Solanum tuberosum	73.54	0.00e+00	1262.00
IUUC-Sbi-114649	Sorghum bicolor	66.85	0.00e+00	1149.00
IUUC-Tca-121729	Theobroma cacao	73.23	0.00e+00	1288.00
IUUC-Tae-123364	Triticum aestivum	65.77	0.00e+00	1146.00
IUUC-Tur-126043	Triticum urartu	65.32	0.00e+00	1135.00
IUUC-Vvi-131704	Vitis vinifera	75.00	0.00e+00	1327.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence