iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043657

UUCD1 version

UUC-GlM-02368

Ensembl Protein ID

GLYMA06G45850.1

UniProt Accession

C6T8R2; C6T8R2_SOYBN

Genbank Protein ID

ACU18214.1; KRH55968.1; KRH55969.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

BT093865; CM000839; CM000839

Gene Name

LOC100786373; GLYMA_06G293400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G45850	GLYMA06G45850.1	GLYMA06G45850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-07	31.9	36	85
E3 activity/RING/U-box	1.30e-07	33.2	33	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+++  C++kw       l ++++++ +CP+C+
   Q: 36   CNICLECVQD-PVVTLCGHLYCWPCIYKWlhfqsTSLDDEEQQRPQCPVCK 85
           99********.9999****************99988888999********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..........tcPvtrqplteedlvPn 58
           +f C I le  +dPvv+ +G+ y   +I kwl  + +          +cPv+++++++++lvP 
   Q: 33   DFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTslddeeqqrpQCPVCKSEVSQSSLVPL 96
           69******************************444444566667789***************96 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MALDHFEETV HQKGNWKSSS EIIADSDRNA SGDFDCNICL ECVQDPVVTL CGHLYCWPCI 60
YKWLHFQSTS LDDEEQQRPQ CPVCKSEVSQ SSLVPLYGRG QTTLPSKGKP RQVGTVIPQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGATAATTA TTGTTATTCT ATTATAAAAT CTCATTGTCT CCGAACTCTT CTTTCCTCGT 60
ACTCCATCAT TTCCTTGTTC TTCTTCCTTC TCTTCATTCT GTCTCTACCC TTCAACGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100786373

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006069	Arabidopsis lyrata	46.94	1.00e-45	176.00
IUUC-Ath-006807	Arabidopsis thaliana	46.94	1.00e-46	179.00
IUUC-Bdi-014665	Brachypodium distachyon	34.27	3.00e-27	115.00
IUUC-Bol-015157	Brassica oleracea	48.19	1.00e-42	166.00
IUUC-Bra-017909	Brassica rapa	47.78	4.00e-45	174.00
IUUC-Sly-111236	Solanum lycopersicum	45.69	2.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence