iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++f+dg  ++v  +C+H fh  C+qkw     +ss + +CP+Cr
   Q: 102  CIICLSEFQDGdtLRVlERCKHGFHVYCIQKW-----LSSSHSSCPTCR 145
           ********77766554156*************.....899999*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MRLLLSSDPQ PELTSTCTSH SCGWKPYSHS NDFAANAFLL LIILFCSFIC VLSLHAAIRC 60
CLRPVLQHVP KPDPDLEATH PDAPPTLVYS PGLNLAGNEA ECIICLSEFQ DGDTLRVLER 120

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Nucleotide Sequence
(Fasta)

AAGACATGAA AGGTTTTTGG GAACTTGTCT GAGTTCCAAT GCGGCTGCTG CTATCATCTG 60
ATCCCCAACC CGAACTTACG TCTACATGTA CCTCTCATAG TTGCGGCTGG AAGCCTTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G17245

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006132	Arabidopsis lyrata	96.97	2.00e-77	280.00
IUUC-Bol-015803	Brassica oleracea	74.67	7.00e-53	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence