iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006592

Ensembl Protein ID

AT4G21520.1

UniProt Accession

Q8H1R6; Q8H1R6_ARATH

Genbank Protein ID

AAN13056.1; AEE84462.1

Protein Name

Putative uncharacterized protein At4g21520; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

AY142505; CP002687

Gene Name

At4g21520; F18E5.140; F18E5_140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G21520	AT4G21520.1	AT4G21520.1
AT4G21520	AT4G21520.2	AT4G21520.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-18	66.4	110	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf......sdtl...lvsGsdDgtikvWDlrtgvl 35
           +sv+++++      sd+l   ++++++D+ i++WD ++g l
   Q: 110  ESVYDFCWypymsvSDPLtcvFATSTRDHPIHLWDSTSGEL 150
           589*******999966334459*************999976 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGEEEAVAEE NGGLKVESGE QKSSWPTMRF DVSPYRTHHF SKQFRTARNP NNFLKGLKWS 60
PDGSCFLASS EDNTLSLFHL PQDGGDSNGY GVPVPEEDSY GASLLVNEGE SVYDFCWYPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTAATGAC AAACCTGGCG GGCTTTTCTT CCAAATTCCA ATCAAAATCC CTAATCCGGT 60
TTTTGGTTTA AGTTCGGTTC AATTTGTCGG TCTGAGATTG AAAACCTGGT TCAGGTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000305	Aegilops tauschii	71.29	3.00e-132	463.00
IUUC-Aml-001893	Ailuropoda melanoleuca	42.49	5.00e-79	288.00
IUUC-Atr-002472	Amborella trichopoda	65.92	3.00e-156	544.00
IUUC-Aca-004937	Anolis carolinensis	44.04	5.00e-77	280.00
IUUC-Aly-006492	Arabidopsis lyrata	96.96	0.00e+00	821.00
IUUC-Acl-008296	Aspergillus clavatus	28.12	9.00e-18	83.20
IUUC-Ani-009149	Aspergillus nidulans	27.89	4.00e-25	108.00
IUUC-Aor-009938	Aspergillus oryzae	25.92	3.00e-24	105.00
IUUC-Ate-010481	Aspergillus terreus	27.49	1.00e-31	130.00
IUUC-Ame-011296	Astyanax mexicanus	45.86	5.00e-74	271.00
IUUC-Bgr-012232	Blumeria graminis	25.74	1.00e-16	80.50
IUUC-Bta-012362	Bos taurus	41.45	2.00e-78	285.00
IUUC-Bdi-014971	Brachypodium distachyon	69.05	5.00e-157	546.00
IUUC-Bol-016557	Brassica oleracea	90.51	0.00e+00	760.00
IUUC-Bra-016734	Brassica rapa	91.69	0.00e+00	762.00
IUUC-Cja-019681	Callithrix jacchus	40.21	1.00e-75	276.00
IUUC-Cfa-020148	Canis familiaris	42.32	3.00e-78	285.00
IUUC-Cpo-022128	Cavia porcellus	43.10	2.00e-79	289.00
IUUC-Cre-022680	Chlamydomonas reinhardtii	49.85	2.00e-84	305.00
IUUC-Csa-023779	Chlorocebus sabaeus	41.11	3.00e-77	281.00
IUUC-Cin-025318	Ciona intestinalis	38.91	5.00e-55	207.00
IUUC-Cne-026778	Cryptococcus neoformans	29.60	3.00e-35	142.00
IUUC-Dre-027809	Danio rerio	42.73	2.00e-78	285.00
IUUC-Dno-028896	Dasypus novemcinctus	42.91	5.00e-67	247.00
IUUC-Dor-030656	Dipodomys ordii	41.52	7.00e-67	247.00
IUUC-Dme-031828	Drosophila melanogaster	30.93	3.00e-48	185.00
IUUC-Eca-033305	Equus caballus	42.94	2.00e-80	292.00
IUUC-Eeu-034936	Erinaceus europaeus	38.17	2.00e-31	129.00
IUUC-Fca-036371	Felis catus	42.65	7.00e-80	290.00
IUUC-Gmo-039283	Gadus morhua	46.43	5.00e-55	206.00
IUUC-Gac-042297	Gasterosteus aculeatus	45.54	1.00e-54	205.00
IUUC-Gma-044331	Glycine max	69.03	6.00e-162	562.00
IUUC-Ggo-044938	Gorilla gorilla	41.05	4.00e-78	285.00
IUUC-Hsa-046795	Homo sapiens	43.67	6.00e-78	284.00
IUUC-Itr-048964	Ictidomys tridecemlineatus	43.02	1.00e-79	290.00
IUUC-Lch-050551	Latimeria chalumnae	37.69	2.00e-50	192.00
IUUC-Lpe-051458	Leersia perrieri	67.24	2.00e-140	491.00
IUUC-Loc-052833	Lepisosteus oculatus	47.74	8.00e-73	266.00
IUUC-Laf-054404	Loxodonta africana	43.20	6.00e-70	257.00
IUUC-Mcc-055500	Macaca mulatta	40.79	2.00e-77	282.00
IUUC-Meu-056062	Macropus eugenii	41.86	4.00e-11	62.00
IUUC-Mtr-058157	Medicago truncatula	69.75	1.00e-170	592.00
IUUC-Mla-058898	Melampsora laricipopulina	33.22	5.00e-38	150.00
IUUC-Mvi-060351	Microbotryum violaceum	28.83	3.00e-35	141.00
IUUC-Mmr-061204	Microcebus murinus	42.51	7.00e-78	283.00
IUUC-Mdo-062997	Monodelphis domestica	44.44	7.00e-72	263.00
IUUC-Mmu-063379	Mus musculus	40.58	2.00e-78	285.00
IUUC-Mac-065509	Musa acuminata	66.40	2.00e-157	550.00
IUUC-Mpu-066898	Mustela putorius furo	42.15	5.00e-78	284.00
IUUC-Mlu-067405	Myotis lucifugus	42.82	2.00e-75	275.00
IUUC-Nle-069679	Nomascus leucogenys	35.79	8.00e-58	217.00
IUUC-Opr-070544	Ochotona princeps	38.59	8.00e-34	137.00
IUUC-Oan-073233	Ornithorhynchus anatinus	34.05	7.00e-40	156.00
IUUC-Ocu-074700	Oryctolagus cuniculus	42.17	3.00e-76	278.00
IUUC-Oba-075164	Oryza barthii	62.41	1.00e-147	519.00
IUUC-Ogl-077700	Oryza glaberrima	68.78	2.00e-153	538.00
IUUC-Ogu-078612	Oryza glumaepatula	53.87	1.00e-105	379.00
IUUC-Oin-079494	Oryza indica	67.98	6.00e-150	523.00
IUUC-Olo-081051	Oryza longistaminata	75.44	2.00e-131	461.00
IUUC-Ome-081868	Oryza meridionalis	56.87	2.00e-118	421.00
IUUC-Oni-082904	Oryza nivara	68.60	2.00e-153	538.00
IUUC-Opu-084082	Oryza punctata	68.99	2.00e-153	538.00
IUUC-Oru-084683	Oryza rufipogon	68.78	3.00e-150	523.00
IUUC-Osa-085518	Oryza sativa	67.98	2.00e-155	541.00
IUUC-Ola-086492	Oryzias latipes	46.83	4.00e-29	120.00
IUUC-Oga-088207	Otolemur garnettii	41.23	4.00e-78	285.00
IUUC-Oar-089463	Ovis aries	42.60	1.00e-76	279.00
IUUC-Ptr-090994	Pan troglodytes	41.05	4.00e-78	285.00
IUUC-Pan-091793	Papio anubis	40.58	9.00e-77	280.00
IUUC-Psi-093816	Pelodiscus sinensis	42.17	6.00e-80	290.00
IUUC-Ppa-095348	Physcomitrella patens	58.61	8.00e-149	519.00
IUUC-Pfo-096740	Poecilia formosa	43.67	2.00e-80	292.00
IUUC-Pab-098447	Pongo abelii	43.10	4.00e-66	244.00
IUUC-Pop-099065	Populus trichocarpa	74.07	2.00e-174	604.00
IUUC-Pca-101130	Procavia capensis	42.94	7.00e-72	264.00
IUUC-Ppe-101669	Prunus persica	69.37	4.00e-170	590.00
IUUC-Pva-102685	Pteropus vampyrus	41.88	2.00e-23	103.00
IUUC-Pgr-103262	Puccinia graminis	35.87	6.00e-52	197.00
IUUC-Ptt-103932	Puccinia triticina	34.16	5.00e-44	171.00
IUUC-Pte-104073	Pyrenophora teres	22.16	2.00e-12	66.60
IUUC-Rno-105017	Rattus norvegicus	43.03	2.00e-78	285.00
IUUC-Sha-107405	Sarcophilus harrisii	41.84	3.00e-78	285.00
IUUC-Sja-107997	Schizosaccharomyces japonicus	24.40	6.00e-17	80.90
IUUC-Spo-108316	Schizosaccharomyces pombe	31.19	2.00e-33	135.00
IUUC-Smo-108985	Selaginella moellendorffii	53.60	1.00e-129	455.00
IUUC-Sit-109820	Setaria italica	68.24	2.00e-155	541.00
IUUC-Sly-110899	Solanum lycopersicum	69.51	7.00e-164	569.00
IUUC-Stu-112753	Solanum tuberosum	67.92	1.00e-162	565.00
IUUC-Sar-113155	Sorex araneus	40.17	1.00e-73	270.00
IUUC-Sbi-114408	Sorghum bicolor	66.67	1.00e-150	525.00
IUUC-Sre-115186	Sporisorium reilianum	26.29	7.00e-31	127.00
IUUC-Ssc-116125	Sus scrofa	42.55	3.00e-77	281.00
IUUC-Tru-117888	Takifugu rubripes	42.31	8.00e-83	300.00
IUUC-Tsy-119064	Tarsius syrichta	36.90	1.00e-58	219.00
IUUC-Tni-120323	Tetraodon nigroviridis	44.28	2.00e-81	295.00
IUUC-Tca-121784	Theobroma cacao	74.28	2.00e-176	611.00
IUUC-Tae-123366	Triticum aestivum	68.34	2.00e-154	538.00
IUUC-Tur-126046	Triticum urartu	71.71	3.00e-131	460.00
IUUC-Tbe-127406	Tupaia belangeri	39.78	1.00e-35	143.00
IUUC-Ttr-128268	Tursiops truncatus	42.25	2.00e-76	279.00
IUUC-Vpa-130534	Vicugna pacos	40.91	2.00e-50	192.00
IUUC-Vvi-131612	Vitis vinifera	71.50	3.00e-171	595.00
IUUC-Xtr-132969	Xenopus tropicalis	40.95	6.00e-76	277.00
IUUC-Xma-134075	Xiphophorus maculatus	44.28	7.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence