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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007196
UUCD1 version UUC-ArT-01726
Ensembl Protein ID AT4G22410.1
UniProt Accession Q8H148; Q8H148_ARATH
Genbank Protein ID AAN31917.1; AEE84587.1; BAE98689.1
Protein Name Putative uncharacterized protein At4g22285; Putative uncharacterized protein At4g22290; Ubiquitin C-terminal hydrolases superfamily protein
Genbank Nucleotide ID BT000778; CP002687; AK226555
Gene Name At4g22285; At4g22290
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G22410 AT4G22410.1 AT4G22410.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.20e-24 87.2 116 350
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaqEf 95
    +Gl+N++ t ++N ++Q+L+ +++lr++++ +e+ + + k +l++++ +l +++w + k++vsp+e+l+a+ k++++ f+ +q D Ef
   Q: 116 VGLNNIQKTEFVNVTIQSLMRVTPLRNFFHI--PENYQ-----HCKSPLVHCFGELTRKIWhaRNFKGQVSPHEFLQAVMKASKKrFRIGQQSDPVEF 206
    6****************************99..55554.....45679*************999999**********998888777************ PP
   S: 96 laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp.........gkeetkk 184
    +++ll++l+ +l ++ k +s+i++ Fqg+l+ + +n+ ++ +fl l l++p +
   Q: 207 MSWLLNTLHMDL-------------------------RTSKDASSIIHKCFQGELEVVKEFQGNENKEISRMSFLMLGLDLPppplfkdvmE------ 273
    ************.........................678999***************************************5554332222...... PP
   S: 185 e......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfc 265
    + l d+L++f e e + + + a+ + ++ k P++L++h+ Rf ++++ ++ek+ + v+fp + ++l+ +
   Q: 274 KniipqvALFDLLKKFDGETVTE----VVRP-----KLARMRYRVIKSPRYLMFHMVRF--KKNNFFKEKNPTLVNFPVKdMELRDYI 350
    12333335556665555554444....2223.....3377889999*************..88999************9989998775 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MVEFQVLDFH FERFCSVSLS NLNVYACLVC GKYFQGRSQK SHAYTHSLEA GHHVYINLLT 60
EKVYCLPDSY EINDPSLDDI RHVLNPRFSR AQVNELDKNR QWSRALDGSD YLPGMVGLNN 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007196|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGTTGAAT TTCAGGTGTT GGATTTTCAT TTTGAGAGGT TTTGCTCTGT GTCCTTGTCC 60
AATCTGAATG TATATGCATG CCTTGTTTGT GGAAAGTACT TCCAAGGAAG AAGCCAGAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007196|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

KEGG ath:AT4G22285
Created Date 25-Jun-2017

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