iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1894__AT4G24015.1	fgenesh2_kg.7__1894__AT4G24015.1	fgenesh2_kg.7__1894__AT4G24015.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	31.7	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f  k++++ +p C+H+fh+dC++ w       + + +CPlCr
   Q: 105  CCVCLGEFelKEELVEMPlCKHIFHLDCIHLW------LYSHNTCPLCR 147
           ******9999777999999*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVDPQSPITP HLYPQAIQLK LYQAFIFSIP ILFSIILFLL FYLFYLKRRA SSLSSPSPMI 60
LPVSSSHQTS SHLPSVCLLD VKVELKDKLH VVLFNEELGT RDSLCCVCLG EFELKEELVE 120

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Nucleotide Sequence
(Fasta)

AACTTTTCAA GTTATGGTTG ATCCTCAATC ACCAATCACA CCACACCTAT ACCCGCAAGC 60
AATTCAACTT AAACTCTACC AAGCCTTCAT CTTTTCCATT CCCATCTTAT TCTCCATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_492461

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007578	Arabidopsis thaliana	99.43	4.00e-45	172.00
IUUC-Bol-015082	Brassica oleracea	91.95	3.00e-53	200.00
IUUC-Bra-018105	Brassica rapa	90.23	2.00e-59	220.00
IUUC-Gma-042696	Glycine max	67.79	8.00e-36	142.00
IUUC-Mtr-058468	Medicago truncatula	61.44	4.00e-32	130.00
IUUC-Pop-098932	Populus trichocarpa	67.35	2.00e-36	145.00
IUUC-Ppe-101687	Prunus persica	62.91	2.00e-34	138.00
IUUC-Sly-110876	Solanum lycopersicum	62.91	5.00e-31	126.00
IUUC-Stu-112209	Solanum tuberosum	61.78	3.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence