iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Stu-111934

Ensembl Protein ID

UniProt Accession

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400003310	PGSC0003DMT400008560	PGSC0003DMT400008560

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	50.75	2.00e-22	102.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKRQFDAGET DWANFTGADD VKKMKKELEE ERKLPMKRQF EANCATTVSG DLKKMKQVIE 60
SPEVDTEAVL LNENLLYEIL KHVDGRTLAT AACVSKQWNQ SALDERLWEL ICTKHNRNQQ 120

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Nucleotide Sequence
(Fasta)

CACTAATCAC ATGGACAAAC TTGTCATTTT CTCACGGCCC ACCCAAAAAC CCAATTCATT 60
ACTTTTCTTT TGTCCCCTTC GATAATCATT TCTACAACCC CCCATCCCAT GTGCTTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	56.83	1.00e-29	121.00
IUUC-Aly-006435	Arabidopsis lyrata	52.60	4.00e-35	139.00
IUUC-Ath-007482	Arabidopsis thaliana	52.63	6.00e-35	138.00
IUUC-Bdi-014906	Brachypodium distachyon	38.64	5.00e-20	89.70
IUUC-Bol-016273	Brassica oleracea	51.46	7.00e-33	131.00
IUUC-Bra-016627	Brassica rapa	51.46	7.00e-33	131.00
IUUC-Gma-043301	Glycine max	57.82	3.00e-35	139.00
IUUC-Hvu-047070	Hordeum vulgare	38.64	4.00e-18	83.20
IUUC-Mtr-057791	Medicago truncatula	53.37	5.00e-35	139.00
IUUC-Mac-064781	Musa acuminata	52.27	4.00e-26	109.00
IUUC-Obr-076578	Oryza brachyantha	39.16	1.00e-22	98.60
IUUC-Ogl-077389	Oryza glaberrima	38.46	3.00e-13	67.00
IUUC-Oin-079212	Oryza indica	38.46	3.00e-13	67.00
IUUC-Pop-098990	Populus trichocarpa	50.00	1.00e-37	147.00
IUUC-Ppe-102068	Prunus persica	59.56	3.00e-33	133.00
IUUC-Smo-108701	Selaginella moellendorffii	40.54	7.00e-19	85.50
IUUC-Sit-110635	Setaria italica	54.05	8.00e-19	85.50
IUUC-Sly-111686	Solanum lycopersicum	79.63	2.00e-68	250.00
IUUC-Sbi-113872	Sorghum bicolor	44.94	7.00e-13	66.20
IUUC-Tca-121336	Theobroma cacao	55.35	3.00e-39	152.00
IUUC-Vvi-131285	Vitis vinifera	53.44	3.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence