iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014665

UUCD1 version

UUC-BrD-00927

Ensembl Protein ID

BRADI3G49870.1

UniProt Accession

I1IBZ3; I1IBZ3_BRADI

Protein Name

Uncharacterized protein

Gene Name

LOC100825837

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G49870	BRADI3G49870.1	BRADI3G49870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-06	26.9	54	116
E3 activity/RING/RING	6.10e-07	30.4	56	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..........tcPvtrqplteedlvPn 58
           f C + le   +Pvv+ +G+ y   +I +wl++ g+           cPv+++ lt +++vP 
   Q: 54   FDCNVCLEFAVEPVVTLCGHLYCWPCIYEWLRRRGHaddrsvstrqPCPVCKAALTLDSFVPL 116
           99*****************************7777779999**999***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C +Cle   + p+v+ CgH+++  C++ w     +   +s s+++ CP+C+
   Q: 56   CNVCLEFAVE-PVVTLCGHLYCWPCIYEWlrrrgHADDRSVSTRQPCPVCK 105
           99****9989.999*******************98888899*********7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MNRAANFRSC KIRMDQASTA GASDKPAAAT SNDSWRRSTS GDVLPATAGG GGCFDCNVCL 60
EFAVEPVVTL CGHLYCWPCI YEWLRRRGHA DDRSVSTRQP CPVCKAALTL DSFVPLYGRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACCGGT ACGGCAACGC CACAAATGTA CTGTTGCGTG GCTTGCTCTG TCCGTCACGT 60
TCCGTGATTG CGTGGCTTCC CTGGCTTCCA CAGTCGTTAG TCTAGTCGGA TTGATCATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006090	Arabidopsis lyrata	51.35	9.00e-26	109.00
IUUC-Ath-006841	Arabidopsis thaliana	54.46	5.00e-26	110.00
IUUC-Bol-015969	Brassica oleracea	50.00	7.00e-25	106.00
IUUC-Bra-016747	Brassica rapa	53.54	2.00e-26	111.00
IUUC-Gma-043657	Glycine max	35.81	2.00e-28	117.00
IUUC-Oba-075301	Oryza barthii	53.38	2.00e-30	125.00
IUUC-Oru-085110	Oryza rufipogon	50.62	2.00e-30	125.00
IUUC-Sly-111102	Solanum lycopersicum	36.73	1.00e-25	109.00
IUUC-Stu-112310	Solanum tuberosum	37.68	1.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence