iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121517

Ensembl Protein ID

EOY23551

UniProt Accession

A0A061G1U5; A0A061G1U5_THECC

Genbank Protein ID

EOY23551.1

Protein Name

E3 ubiquitin-protein ligase

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015414

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015414	EOY23551	EOY23551

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	81.36	3.00e-158	554.00	IUUC-Ath-007192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MELDSIECVS STDGMDEDEI HHHNLHHPHP HQGHHQFSSS KPHNGTNNTA NANSINNIVG 60
PTAIAPATSV HELLECPVCT NSMYPPIHQC HNGHTLCSTC KTRVHNRCPT CRQELGDIRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAGAAAG GAAAAGAAAG AGAAAATTTA GAGAGAAGAA GAAGAGAGAC AGGAAAAAGC 60
AAAAAAAAAA AAAAATTGGG GTGGGACTGG GGGTTCACCG TTCATTTTGT AAATTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

tcc:TCM_015414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006522	Arabidopsis lyrata	81.95	1.00e-161	561.00
IUUC-Ath-007192	Arabidopsis thaliana	81.66	3.00e-161	560.00
IUUC-Bdi-014729	Brachypodium distachyon	78.24	6.00e-157	545.00
IUUC-Bol-015983	Brassica oleracea	78.40	3.00e-158	550.00
IUUC-Bra-016910	Brassica rapa	79.29	7.00e-160	555.00
IUUC-Mtr-058699	Medicago truncatula	86.98	3.00e-172	596.00
IUUC-Mac-065670	Musa acuminata	82.54	7.00e-165	572.00
IUUC-Oba-075289	Oryza barthii	92.58	2.00e-144	504.00
IUUC-Ppa-095212	Physcomitrella patens	87.79	2.00e-141	493.00
IUUC-Pop-100033	Populus trichocarpa	88.46	3.00e-171	593.00
IUUC-Ppe-101960	Prunus persica	87.32	3.00e-174	603.00
IUUC-Smo-109412	Selaginella moellendorffii	86.92	7.00e-141	492.00
IUUC-Sly-111259	Solanum lycopersicum	80.83	5.00e-158	549.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence