iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006528

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

UBC9; ARALYDRAFT_913730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_701472.1	scaffold_701472.1	scaffold_701472.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	3.20e-56	189.6	5	139
UBD/UBC-like/UBD_UBC	2.20e-74	248.8	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+++pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+W
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQW 93
           899*********************.9************************************************************9..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           spal++++vllsi+sll++pnp++pl  e+a+++k+++++y++++r
   Q: 94   SPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139
           ******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaa 92
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp++spy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+a
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPA 96
           899***************************************************************************************** PP
   S: 93   ltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           lt+skvlls+csll+d++pddplv+eia++yktdk+ky+ +ar wt
   Q: 97   LTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWT 142
           *********************************************8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SESPYSGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTCAATTG GATTTTGGAT ATGGCATCGA AACGGATTTT GAAGGAATTG AAGGATCTGC 60
AGAAGGATCC TCCTACTTCA TGTAGCGCAG GTACCCCTTT TTTTAAGTCG GTTTAATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_913730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007495	Arabidopsis thaliana	99.32	2.00e-85	306.00
IUUC-Bol-015822	Brassica oleracea	98.65	4.00e-85	305.00
IUUC-Bra-016748	Brassica rapa	98.65	2.00e-86	312.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence