iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121413

Ensembl Protein ID

EOX95790

UniProt Accession

A0A061DSV2; A0A061DSV2_THECC

Genbank Protein ID

EOX95790.1

Protein Name

Ubiquitin-conjugating enzyme 28

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005204

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005204	EOX95790	EOX95790

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.20e-56	191.2	5	139
UBD/UBC-like/UBD_UBC	4.20e-75	251.3	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsvesv 101
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspal++++v
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPALTISKV 102
           899*********************.9************************************************************9..************ PP
   S: 102  llsiqsllaepnpesplneeaaellkknreeykkkvr 138
           llsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 103  LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 139
           *********************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltlskvlls 101
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+alt+skvlls
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLS 105
           899************************************************************************************************** PP
   S: 102  lcslladaepddplvaeiariyktdkekykriarewt 138
           +csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 106  ICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWT 142
           ************************************8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYSGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAATAAAAC ACTCAGGGAC CAATCAGACA TAAAACCAAC CATGCCCAAC CACAGCCGTT 60
CGTTCGTTCG TTTGTAGCTT TCATTAGGAG ACCCCACATC TCTCCCCCGG ATTAATATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005886--C:plasma membrane
GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001563	Ailuropoda melanoleuca	77.55	5.00e-69	252.00
IUUC-Aly-006364	Arabidopsis lyrata	98.65	4.00e-85	305.00
IUUC-Ath-007495	Arabidopsis thaliana	97.30	1.00e-83	301.00
IUUC-Ani-009401	Aspergillus nidulans	80.95	1.00e-71	260.00
IUUC-Csa-023668	Chlorocebus sabaeus	77.55	5.00e-69	252.00
IUUC-Cho-024987	Choloepus hoffmanni	77.55	5.00e-69	252.00
IUUC-Dno-030067	Dasypus novemcinctus	77.55	5.00e-69	252.00
IUUC-Dme-031594	Drosophila melanogaster	80.27	3.00e-70	256.00
IUUC-Ete-032540	Echinops telfairi	77.55	5.00e-69	252.00
IUUC-Eca-034167	Equus caballus	77.55	5.00e-69	252.00
IUUC-Gac-042516	Gasterosteus aculeatus	80.95	3.00e-70	256.00
IUUC-Hvu-047546	Hordeum vulgare	94.59	2.00e-82	296.00
IUUC-Itr-048743	Ictidomys tridecemlineatus	77.55	5.00e-69	252.00
IUUC-Lpe-050972	Leersia perrieri	97.97	2.00e-84	303.00
IUUC-Mac-065211	Musa acuminata	98.65	9.00e-86	308.00
IUUC-Mpu-065724	Mustela putorius furo	77.55	5.00e-69	252.00
IUUC-Obr-076658	Oryza brachyantha	97.97	2.00e-84	303.00
IUUC-Ogl-077124	Oryza glaberrima	97.30	3.00e-84	302.00
IUUC-Oin-080092	Oryza indica	97.30	3.00e-84	302.00
IUUC-Opu-083833	Oryza punctata	97.30	3.00e-84	302.00
IUUC-Osa-086291	Oryza sativa	96.62	1.00e-83	300.00
IUUC-Oga-088915	Otolemur garnettii	77.55	5.00e-69	252.00
IUUC-Ppa-095564	Physcomitrella patens	98.65	6.00e-85	305.00
IUUC-Pfo-096472	Poecilia formosa	80.95	2.00e-70	256.00
IUUC-Pca-100678	Procavia capensis	77.55	5.00e-69	252.00
IUUC-Ppe-101387	Prunus persica	99.32	1.00e-85	306.00
IUUC-Pva-102770	Pteropus vampyrus	77.55	5.00e-69	252.00
IUUC-Smo-109317	Selaginella moellendorffii	97.97	5.00e-85	305.00
IUUC-Sly-111571	Solanum lycopersicum	99.32	2.00e-85	306.00
IUUC-Stu-112764	Solanum tuberosum	99.32	2.00e-85	306.00
IUUC-Sbi-114213	Sorghum bicolor	96.62	9.00e-84	301.00
IUUC-Tbe-127329	Tupaia belangeri	71.43	1.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence